Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01418 ATGGCGGAGCTTAATGTAAGCAGCAGCAGCAGCAGCAAAAAAAGGGTTTTAGGTGGCATGTTGAAGTTGAAGAGTGTGTTGGAAAAGCTTCAAAAGAGTCTCGTATTGCGCAGAAATAATAAATCAAGTTCTTCCTATGACGGAGATTATGAAGAAGGACATTTTGCAGTGATTGCTGAGCGTGAAGAGGAGACAAAGAGATTCTTGGTGCCATTGAGCTGTTTAAACAACTCAACATTCTTGAGGCTATTGGAGGAAGCAGCAGAAGAGTATGGGTTTGATCAACATGGTGCACTAACCATTCCTTGCAGGCCTAGTGAACTTGAGATGCTATTGGCTCAGCAATGGAAAGAAAAAGGGAAATTCTGA 369 0.4228 MAELNVSSSSSSKKRVLGGMLKLKSVLEKLQKSLVLRRNNKSSSSYDGDYEEGHFAVIAEREEETKRFLVPLSCLNNSTFLRLLEEAAEEYGFDQHGALTIPCRPSELEMLLAQQWKEKGKF 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01418 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 38 111 IPR003676 GO:0009733
Pumo11g01418 122 Pfam Auxin responsive protein 23 112 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01418 Pumo-Chr11 44486310 44486678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01418 13 113 Calmodulin-binding Proteins AT4G34750 35.644 1.59e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01418 - K14488 gmx:102667608 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01418 11 44486310 44486678 Pumo11g01418 11 44486310 44486678 ECH
Pumo4g03842 4 78692152 78692634 Pumo11g01418 11 44486310 44486678 PCT