Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01368 ATGGCGCGAGTGGATCTGGACGGGAAGCCCATCAAGGCACTTACGATCTGCATGATCGGCGCTGGCGGGTTCATCGGCTCGCACCTCTGCGAGAAGCTCATGTCCGAAACCCCTCACACGGTCCTCGCCTTGGACGTCTACAACGACAAGATCAAGCACCTCCTCGAACCCGATTCGCTCCCTTGGGCCGGTCGCATCACCTTCCACCGCCTCAACATCAAACACGACTCTCGCCTCGAAGGCCTCATCAAGATGGCAGATCTCACGATTAATCTGGCTGCGATTTGCACCCCCGCGGATTACAATACGCGCCCTCTCGACACCATTTACAGCAATTTCATCGACGCGCTCCCCGTGGTGAAATACTGTTCGGAGAACAACAAGCGCCTTATCCATTTCTCCACTTGCGAAGTGTACGGCAAAACGATTGGAGCCTTTCTCCCCAAAGATAGTCCTCTTCGTAAGGATCCGGCATACTATGTTCTTAAAGAAGACGAGTCTCCATGCATTTTTGGTTCTATTGAAAAGCAGAGGTGGTCTTATGCTTGTGCAAAACAGTTGATTGAGAGGCTGATTTACGCTGAGGGTGCTGAAAATGGCTTGGAGTTCACAATTGTGAGGCCTTTTAACTGGATTGGACCTCGAATGGATTTCATTCCTGGAATTGATGGTCCAAGTGAGGGTGTTCCTCGGGTTCTTGCATGCTTTAGCAACAATCTTCTCAGAGGAGAGCCCCTCAAGCTTGTGGACGGTGGCCAGTCCCAGAGAACCTTTGTTTACATTAAAGACGCTATTGAAGCTGTCTTGTTGATGATTGAAAATCCTGCCAGGGCCAATGGCCACATATTTAATGTGGGTAACCCAAACAACGAGGTTACTGTTAGGCAGCTTGCTGAAATAATGATTCAGGTTTACTCAAAGGTAAGTGGAGAACAAACTCCTGAAACACCTACCATTGATGTGAGCTCAAAAGAATTTTATGGTGAGGGATATGATGATAGTGACAAGAGAATTCCTGACATGACCATAATAAACAGGCAGCTTGGATGGAATCCTAAGACTTCACTTTGGGACCTGCTCGAGTCCACTCTGACCTATCAGCACAGGACATATGCCGAAGCCATTAAGAAAGTCATTGCAAAACCCGTTGCAAGTTAA 1158 0.4836 MARVDLDGKPIKALTICMIGAGGFIGSHLCEKLMSETPHTVLALDVYNDKIKHLLEPDSLPWAGRITFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGAFLPKDSPLRKDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEIMIQVYSKVSGEQTPETPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVIAKPVAS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01368 385 Pfam NAD dependent epimerase/dehydratase family 16 286 IPR001509 -
Pumo11g01368 385 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 368 IPR036291 -
Pumo11g01368 385 Gene3D - 14 376 - -
Pumo11g01368 385 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 15 370 - -
Pumo11g01368 385 FunFam UDP-D-apiose/UDP-D-xylose synthase 2 14 377 - -
Pumo11g01368 385 CDD Arna_like_SDR_e 15 370 IPR045869 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01368 Pumo-Chr11 43764904 43767924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01368 13 380 Miscellaneous Gene Families AT1G02000 21.374 1.59e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01368 K12449 - gmx:102667779 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03802 4 78190734 78193710 Pumo11g01368 11 43764904 43767924 PCT