Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01273 ATGGGCGTGTTCAGCGAAGACCCGAATCCCAACCCGAACCCTGTTGTGATCCGCGAGGTTTGGGCCTCGAATCTTGAATCCGAATTCGAACTCATCCGCGAACTCATCGATCGCTACCCTTTTATCTCAATGGACACCGAGTTTCCCGGTGTTATTTTCAGACCACACGTGGACCCCACAAAACCCTACAACAACCGCAGCCGCCGCCCTTCCGACCACTACCGCCTCCTCAAGTCCAACGTTGACGCTCTCAACCTGATCCAGGTCGGCCTCACTCTCACCGACGCTGCCGGTAACCTCCCCGAAGAAACCGGTAACCGCTTCATCTGGGAATTCAACTTCCGTGACTTCGACGTGGCGCGTGACTCCTACGCGCCTGACTCCATCGCACTTCTCCGCCGCCAGGGGATCGATTTCGAGCGGAACAACACCGAGGGCGTGGATTCCACGCGCTTTGCGGAATTGATGATGTCTTCTGGACTCGTCTGCAACGATGCTGTGAGTTGGGTCACGTTTCACAGCGCGTACGATTTCGGTTACTTGGTGAAGATCCTGACCCGAAGAAATTTACCGACCAGTTTGGAGGAATTCTTGAAAATCGTGAAGGTGTTCTTTGGGGACAACGTTTATGATGTGAAGCACATGATGAGGTTCTGCGATACGCTCTATGGCGGCTTGGACCGCGTTGCACGGACCCTTAACGTGGACCGCGCCGTAGGGAAGTGCCACCAGGCTGGGTCAGACAGCTTGCTGACCTGGCACGCTTTCCAGAAGATTGTTGACATTTATTTTGTAAAGGATGAGCACCGAAAACATGCCGGTGTATTGTATGGACTAGAGGTCTCTTGTTAA 852 0.5376 MGVFSEDPNPNPNPVVIREVWASNLESEFELIRELIDRYPFISMDTEFPGVIFRPHVDPTKPYNNRSRRPSDHYRLLKSNVDALNLIQVGLTLTDAAGNLPEETGNRFIWEFNFRDFDVARDSYAPDSIALLRRQGIDFERNNTEGVDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRRNLPTSLEEFLKIVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDIYFVKDEHRKHAGVLYGLEVSC 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01273 283 FunFam Putative CCR4-associated factor 1 7 7 283 - -
Pumo11g01273 283 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 15 280 IPR039637 GO:0004535|GO:0030014
Pumo11g01273 283 Pfam CAF1 family ribonuclease 20 148 IPR006941 -
Pumo11g01273 283 Gene3D - 5 282 IPR036397 GO:0003676
Pumo11g01273 283 SUPERFAMILY Ribonuclease H-like 10 280 IPR012337 -
Pumo11g01273 283 Coils Coil 283 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01273 Pumo-Chr11 42345080 42346176 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01273 K12581 - gmx:100811298 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03725 4 77028050 77028990 Pumo11g01273 11 42345080 42346176 PCT