Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01159 ATGGCGTGTAGGCGTAGAAGTAGAATGAAGTTACGGAAGACGCTTGCGGTTTTGCGAACAAGCGGCGGAGTACATGCACGCGTGTACCCATATACACTTGTTATTACACTCTCATCAATAGCTTCATATATCATATCTATAGCCATGCCTGAGGCTCCTAGCCACTACCTTTGCAACAAGCCAAATGGCAAAGTTGGTGATGATGGTGCTACTAATACTAGCATCATCATCGAGCACAACAATAAGAAAGCACTGAAATACATTGAGGATGTTACCATCAACGCTGATGAAATTCAGAAAAGGATCCTTGCTGAGATCCTTTCTTCTAGTGCACACGTTGAGTACCTTCAACGCCATGGCTTAGAGGGGCGCACAGACAGAGACACTTTCAAGAAGATCATGCCTGTGGTGACATACGAGGATTTGAAGCCAGATATTGATCGTATAGCAAATGGTGATACCTCCCCAATTTTATGTTCCAAACCTATTTCTGAGTTCCTCACTAGCTCTGGAACATCTGGTGGGGAGAGAAAACTGATGCCAACCATTGAAGATGAGCTAGAGCGAAGATCATTGCTCTACAGCCTCTTGATGCCAGTGATGGACCAATTTGTTCCCGGTTTAGACAAAGGCAAAGGGATGTACTTTTTGTTCATAAAATCAGAAGCCAAGACCCCTGGTGGGCTCTTAGCTCGTCCAGTTCTAACAAGTTACTACAAGAGTTCACACTTCAAGAACAAAACACACGGATACGACCCTTACACAAACTACACTAGCCCCATTGAAACCATTCTCTGCCTAGACTCTTACCAAAGCATGTACTCTCAAATGCTTTGTGGACTTTTTCAAAACGAGCAAGTTCTCCGTGTTGGGGCTGTTTTCGCCTCAGGTTTCATCCGTGCCATTAAGTTCTTAGAAAAGCATTGGGTCAGTTTGTGTCATGACATAAGAAATGGCACCATAGACCCTGAAATCAGTGACTCATCCGTTAGAGAGGCCATCATGAAGATACTCAAACCAAGCCCCAAGCTTGCGGATTTCATAGAGGGTGAGTGCAAGAAGGGGTCGTGGAAGGGGATCATTACTAGGTTGTGGCCTAACACTAAGTATGTTGATGTTATTGTTACTGGAACCATGGCTCAGTATATTCCTATATTGGATTACTATAGCAATGGTCTTCCCCTTGTTTGCACCATGTATGCTTCTTCTGAGTGTTACTTTGGCCTCAACTTGAACCCTTTGTGTGATCCGAGTGAGGTGTCTTACACCCTCATTCCCACCATGGCCTACTTTGAGTTCTTGCCCCTCAATAAGATGAAGGGACATGCCAATTCAATTTCTCACACTGAGCAGGAACGTTTGGTTGATCTTGTGGATGTGGAGTTGGGTCAAGAATATGAGCTTGTGGTCACCACTTACGCAGGACTTTATAGGTACCGGGTTGGTGACATCCTCCGCGTGGCAGGATTCAAGAACAAGGCACCTCAATTCAACTTCGTGTGCCGAAAAAACGTGGTTTTGAGCATTGATTCTGACAAGACCGATGAGGTTGAGCTACAAAACGCTGTGAAGAATGGAGCAAACCACCTTGCACAATTCGGTGCATCACTCACAGAATACACAAGCTGTGCTGACACGTCCACTATCCCTGGCCACTATGTACTATACTGGGAAATTGGCATGAACAATAATATTGATCAAACCCCAATTCCTGGTTCTGTTTTTGAGGAGTGTTGCTTTGCAGTTGAAGGGTCTCTCAACAGCGTGTATAGACAAGGGAGGGTATCAGAGTCCATTGGACCATTGGAAATCAAGATTGTGGAGAGTGGAACATTTGACAAGCTTATGGACTTTGCTCTTAGCCAAGGTGCGTCCATAAATCAGTATAAGACACCTCGTTGTGTGAAATATGCTTCCATTGTTGAGCTTCTTGACTCTAAGACAGTTTCCAATTACTTCAGTCCAAAGTGTCCACAGTGGGTTCCTGGTCACAAGAAGTGGTGCATGTACCCTTGA 2016 0.4469 MACRRRSRMKLRKTLAVLRTSGGVHARVYPYTLVITLSSIASYIISIAMPEAPSHYLCNKPNGKVGDDGATNTSIIIEHNNKKALKYIEDVTINADEIQKRILAEILSSSAHVEYLQRHGLEGRTDRDTFKKIMPVVTYEDLKPDIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEDELERRSLLYSLLMPVMDQFVPGLDKGKGMYFLFIKSEAKTPGGLLARPVLTSYYKSSHFKNKTHGYDPYTNYTSPIETILCLDSYQSMYSQMLCGLFQNEQVLRVGAVFASGFIRAIKFLEKHWVSLCHDIRNGTIDPEISDSSVREAIMKILKPSPKLADFIEGECKKGSWKGIITRLWPNTKYVDVIVTGTMAQYIPILDYYSNGLPLVCTMYASSECYFGLNLNPLCDPSEVSYTLIPTMAYFEFLPLNKMKGHANSISHTEQERLVDLVDVELGQEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAVKNGANHLAQFGASLTEYTSCADTSTIPGHYVLYWEIGMNNNIDQTPIPGSVFEECCFAVEGSLNSVYRQGRVSESIGPLEIKIVESGTFDKLMDFALSQGASINQYKTPRCVKYASIVELLDSKTVSNYFSPKCPQWVPGHKKWCMYP 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01159 671 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 81 657 IPR004993 -
Pumo11g01159 671 Pfam GH3 auxin-responsive promoter 88 636 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01159 Pumo-Chr11 40356454 40361301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01159 73 654 EF-hand Containing Proteins AT1G23160 49.661 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01159 K14487 - gmx:100783196 1189.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01159 11 40356454 40361301 Pumo11g01159 11 40356454 40361301 ECH
Pumo4g03617 4 75108980 75112375 Pumo11g01159 11 40356454 40361301 PCT