Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02302 ATGTCGAAGCTGCTTCTACCCACTCCTCCCCTCACCCTCTCCATTCACCGCTGCAACAACACCTTGTCTTTATCTTCCCCTTCTGCCCTTCAATTCCAATGCCGATTCTCCCTTTCTCTTCCCACTCTCACTCCCTTCCGCTCCCACCGCGTGCGTAGAAGAAGAGACCTCTCCCTTCGCGCTTTCGATTCGTCTTCCGACGCCAAAAGCGAAGAAGAAGTTAAAGAAGATGGCGGCGTTGACGTCCAGAGTGTTAGGATTGCCGACGAGGATTATCCGAGCGGCGAGTTCGATTTTGAACCGGTTACCGGATGGAGAAGCTTCCTCGTCAAGCTTAAGATGCTCGTCGCGTTCCCTTGGGAGCGTGTCCGCAAGGGCAGCGTCCTCACAATGAAGCTTCGTGGCCAGATATCTGATCAAGTGAAGAGTAGGTTCTCTCCAGGACTTTCTCTGCCTCAAATTTGTGAGAACTTTTTGAAAGCAGCATATGATCCTCGTATTTCTGGGATCTATCTTCATATTGATAGTTTAAATTGCGGGTGGGGTAAAGTAGAAGAAATTCGAAGGCATATATTGGATTTCAAAAAATCAGGAAAATTTGTTCTGGCTTATGTTCCTTTATGTCAAGAAAAAGAGTATTACCTTGCGTGTGCATGTGACGAGATATACGCCCCACCCAGTGCTTACTTTTCTTTGTTTGGATTGACTGTTCAAGCCTCGTTCCTCAGAGGTATTTTAGATAACATAGGAATTGAACCACAAGTGGAAAGGATTGGAAAATACAAAAGTGCAGGAGATCAACTAGCTCGAAGAACCATGTCTGAAGAAAATTGTGAGATGCTGACCGCATTGCTTGATAATATCTATACAAATTGGCTGGATGAAGTCTCTTCTGCCAAAGGAAAAAGAAGAGAAGATATTGAGAAATTCATAAATGAAGGTGTTTATCAAGTAGACAAGCTGAAAGAAGAGGGACTCGTATCAAATATAATCTATGATGATGAGATTACTGCCATGTTGAAGGAGAGACTTGGAGTGAAACCAGATAAAGATCTGCCTACGGTGGATTACAGGAAATACTCTCGAGTTAGGAAATGGACTGTTGGAATATCAGGTGGTCAAGAACTTATAGCCATTATCCGAGCGTCAGGGAGTATTAGTCGTGTAGAGAGTCAATTAAGTGTCTCTAGCTCAGGCATCATTGCAGAGAAGTTCATTGAGAAGATTCGCACTGTCAGAGAGTCAAAAAAATTTAAGGCTGCTATCATCAGAATTGACAGTCCTGGAGGTGATGCTCTTGCTTCTGATTTGATGTGGAGAGAAATCCGGCTTTTGGCTGCTTCAAAACCAGTCATTGCTTCAATGTCTGACGTGGCAGCAAGTGGAGGGTACTACATGGCAATGGGAGCTGATGCTATTGTAGCAGAAAGTCTTACCTTAACTGGTTCTATTGGAGTGGTCACAGGAAAATTTAACCTGGGGAAACTGTATGAGAAGATCGGCTTTAACAAAGAAATTATATCAAGGGGAAGATATTCCGAGCTCCTTGCTGCTGAACAGCGTCCTTTCAGACCAGATGAAGCAGAGCTATTCGCCAAATCTGCTCAGCATGCTTATAAACAATTTCGAGACAAGGCAGCTTTGTCCAGATCAATGACTGTAGAGAAGATGGAGGAGGTTGCACAGGGAAGGGTTTGGACTGGTAACGATGCAGCTTCACGTGGTTTAGTTGATGCTATTGGTGGCCTTTCTCGAGCTATCGCCATAGCAAAAATGAAGGCCGATATACCTCAAGACAGACAGGTTACACTTGTGGAGATCTCCAGAGCCAGCCCTTCTCTACCCGAGATTTTGTTAGGCGTAGGGAGTTCCATCGTTGGAGCTGACAGAACAGTGAAGGAGCTGCTACAGGGCTTGACATTTTCTGATGGAGTTCAAGCCCGGATGGATGGAATCATGTTTCAAACATTGGAAGATTATCCTTTTGGCAAGCCCATTTTGTCAATAATAAAAGATTATCTCAGTTCCCTGTAG 2034 0.4444 MSKLLLPTPPLTLSIHRCNNTLSLSSPSALQFQCRFSLSLPTLTPFRSHRVRRRRDLSLRAFDSSSDAKSEEEVKEDGGVDVQSVRIADEDYPSGEFDFEPVTGWRSFLVKLKMLVAFPWERVRKGSVLTMKLRGQISDQVKSRFSPGLSLPQICENFLKAAYDPRISGIYLHIDSLNCGWGKVEEIRRHILDFKKSGKFVLAYVPLCQEKEYYLACACDEIYAPPSAYFSLFGLTVQASFLRGILDNIGIEPQVERIGKYKSAGDQLARRTMSEENCEMLTALLDNIYTNWLDEVSSAKGKRREDIEKFINEGVYQVDKLKEEGLVSNIIYDDEITAMLKERLGVKPDKDLPTVDYRKYSRVRKWTVGISGGQELIAIIRASGSISRVESQLSVSSSGIIAEKFIEKIRTVRESKKFKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMSDVAASGGYYMAMGADAIVAESLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGRYSELLAAEQRPFRPDEAELFAKSAQHAYKQFRDKAALSRSMTVEKMEEVAQGRVWTGNDAASRGLVDAIGGLSRAIAIAKMKADIPQDRQVTLVEISRASPSLPEILLGVGSSIVGADRTVKELLQGLTFSDGVQARMDGIMFQTLEDYPFGKPILSIIKDYLSSL 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02302 677 Gene3D - 269 362 - -
Pumo10g02302 677 Gene3D - 126 268 - -
Pumo10g02302 677 PIRSF Protease_4_SppA 60 677 IPR004634 GO:0006465|GO:0008233|GO:0016020
Pumo10g02302 677 SUPERFAMILY ClpP/crotonase 115 332 IPR029045 -
Pumo10g02302 677 CDD S49_Sppa_N_C 377 591 IPR047272 -
Pumo10g02302 677 PANTHER PROTEASE 4 85 676 - -
Pumo10g02302 677 CDD S49_SppA_67K_type 129 342 IPR047217 -
Pumo10g02302 677 NCBIfam signal peptide peptidase SppA 377 591 IPR004635 GO:0006508|GO:0008233
Pumo10g02302 677 Gene3D - 373 519 - -
Pumo10g02302 677 Gene3D - 520 637 - -
Pumo10g02302 677 Pfam Peptidase family S49 194 346 IPR002142 GO:0006508|GO:0008233
Pumo10g02302 677 Pfam Peptidase family S49 445 595 IPR002142 GO:0006508|GO:0008233
Pumo10g02302 677 SUPERFAMILY ClpP/crotonase 377 582 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02302 Pumo-Chr10 32637867 32650605 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02302 K04773 - gmx:100781522 1135.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01186 4 15119186 15137027 Pumo10g02302 10 32637867 32650605 PCT