Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02279 ATGCGGCGACGGGCCGCCGAGTATCGGCGCCCGGTTCGGCGGCGGTTCTCTCATTGGATCTGGTTGCTTCTCGGCGCCTTCTCTCTCGCCGCTTTGGTTCTCTTCTTCGTGCAACACAATCACCGCGAGGATCGGGTCCAACACCCTCTTCTGGAGAGAAATGCTAAAGTTGAACATTTTGCTAAGAGATGGAATTTTACTGAAGAAATTTTCAGTGCAACATCCTTTTCACGGCAATTATCAGAGCAAATGGTTCTGGCCAAGGCTTATGTGATTATTGCCAAAGAGCACAATAATCTTCATCTTGCCTGGGAGCTTAGCTCAAAGATTAGAAGTTGCCAGCTTTTGCTTTCAAAAGCTGCCATGACAGGGGAGCCTGTGACCATGGAGGAAGCTGAGCCAATTATTAAAAGCATGTCTTCTCTAATTTTCAAGGCACAAGATGTCCATTATGACATTGCAACCACTATAGTGACAATGAAATCACACATTCAAGCACTTGAAGAGCGTGCAAATACAGCAACAGTTCAAAGCACCGTGTTTGCTCAAATATCAGCTGAAGCACTACCCAAGAGTCTTCATTGCTTAAATGTGAAACTTATGGCTGATTGGCTGAAGATGCCATCCCTGCAAAAACTCTCACATGAGAGTAGAATCTCCCCCCGGCTCACAGATAACAATCTATATCATTTCTGCATTTTTTCAGATAATGTACTGGCTGCATCTGCAGTTGTTAACTCAACAGTCATCAATGCTGACCATCCAAAACAGTTAGTCTTTCACATTGTTACTGATGGTATCAATCATGGAGCAATGCAAGCGTGGTTCCTCAGTAATGACTTTAAAGGGGCTACCGTAGAGGTGCAGAATATTGAGGAATTTCATTGGTTGAATGAATCTTATTCTCCAATTGTCAAACAGCTACACAGGCCAGAATCACGGGCCTTCTATTCTGGACCTTATCAAGGAGTAAATGTTGAGCCAAAATTGCAGAACCCCAAGTTTTTGTCGTTACTAAATCATCTTCGGTTTTACATCCCTGAGATTTATCCACTGCTTGAGAAGGTTATTTTCCTTGATGATGATGTTGTTGTTCAGAAGGACCTAACCCCACTTTTCACACAGGATTTGCATGGAAATGTGAATGGTGCTGTTGAAACTTGTCTAGAAGCATTTCATAGGTACTACAAGTATCTCAACTTCTCAAATTCAATTATAAGCTCAAAGTTTGATCCACAGGCATGTGGATGGGCACTTGGTATGAATGTTTTTGACTTGGTTGGATGGAGGAAAGCAAATGTGACTGCAAAGTATCATTATTGGCAGGAGCAGAATGCTGATGGGACACTCTGGAAGCTTGGTACGCTCGCACCTGCTCTTCTAAGCTTTTATGGTTTGACAGAACCACTTGACAGAAGATGGCATGTTTTAGGATTGGGTTATGACCTAAATATTGACAACCGCCTGATTGAAAGTGCAGCAGTTATTCACTTTAATGGGAACATGAAACCATGGCTGAAGTTAGCTATAGGCAGGTATAAGCCATTATGGCACAAGTACATAAATCAAAGTCACCCTCATCTACAAGATTGTGCCGCAGGTTAA 1605 0.428 MRRRAAEYRRPVRRRFSHWIWLLLGAFSLAALVLFFVQHNHREDRVQHPLLERNAKVEHFAKRWNFTEEIFSATSFSRQLSEQMVLAKAYVIIAKEHNNLHLAWELSSKIRSCQLLLSKAAMTGEPVTMEEAEPIIKSMSSLIFKAQDVHYDIATTIVTMKSHIQALEERANTATVQSTVFAQISAEALPKSLHCLNVKLMADWLKMPSLQKLSHESRISPRLTDNNLYHFCIFSDNVLAASAVVNSTVINADHPKQLVFHIVTDGINHGAMQAWFLSNDFKGATVEVQNIEEFHWLNESYSPIVKQLHRPESRAFYSGPYQGVNVEPKLQNPKFLSLLNHLRFYIPEIYPLLEKVIFLDDDVVVQKDLTPLFTQDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSKFDPQACGWALGMNVFDLVGWRKANVTAKYHYWQEQNADGTLWKLGTLAPALLSFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWHKYINQSHPHLQDCAAG 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02279 534 Pfam Glycosyl transferase family 8 233 508 IPR002495 GO:0016757
Pumo10g02279 534 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 56 532 IPR029993 GO:0047262
Pumo10g02279 534 CDD GT8_like_1 229 522 - -
Pumo10g02279 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 531 IPR029044 -
Pumo10g02279 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 231 531 IPR029044 -
Pumo10g02279 534 FunFam Hexosyltransferase 231 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02279 Pumo-Chr10 32112160 32115515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02279 1 531 Glycosyltransferase AT2G20810 53.731 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02279 K13648 - gmx:100817381 1032.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02279 10 32112160 32115515 Pumo10g02279 10 32112160 32115515 ECH
Pumo4g01200 4 15273002 15276470 Pumo10g02279 10 32112160 32115515 PCT