Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02019 ATGAAGTCGTTGATGAGCATGAAGACTTGCGTGGGTTCGCGGTTACCGGTTTTAACGGACTCCGAGGCGAGTACCAGGACGCAGCGCGTGAGTTGTCCGAACCGTAGGAATCGGAGGAGTGTGGTTGTGTCGTGCGGTTCGGAGAGGAATGGGAACGAGGGAATGGGTTCGGACTCAGGTTCGTTTTTGTCTCCGAGCCATAATTACGCGATCTTGAAGCACCGGATGGAGATAGCGGCCAAGTCGGAGTATTACGAAGAGGCTGCGAGGATTCGCGACTCGCTGAAGTGCTTCGAAGAGGAGGTGCCCGTTCTGCGTCTTCGGAGATTGTTGAAGGAAGCGGTTGCTGAAGAGAGGTTTCAGGACGCTGCTAGATATCGTGATATGCTAAAAGCAATTGCTCCACATTCTCTCTTAAAATGCTCAAGTGATGCGACAACCTTGGGAATCCGGGTCCAAGTTAAGAGTGTGTATATAGAGGGCAGAAGCCAGCCTTCAGAGGAGGTATATTTCTTTGAATATAGAATCAGAATTACCAATAACACAAACCGCCCTGTTCAACTTCTCAGAAGGCATTGGATTATATCTGATGCTAATGGGAAAACTGAAAATTTATGGGGAATTGGAGTTGTTGGTGAACAGCCAGCTATCTTTCCTAGGAGTAGTTTTGAATTCTCTTCTACATGCCCATTAAACACACAAAATGGTAGAATGGAAGGTGACTTTGAGATGATACATGTTGATCGAGTAGGTTCAAGAGCATTTAATGTGGCTGTTGCCCCTTTTTCTCTCTCTCTACTTGGAGATGGTGATGGTGAAACTACTTGA 828 0.4686 MKSLMSMKTCVGSRLPVLTDSEASTRTQRVSCPNRRNRRSVVVSCGSERNGNEGMGSDSGSFLSPSHNYAILKHRMEIAAKSEYYEEAARIRDSLKCFEEEVPVLRLRRLLKEAVAEERFQDAARYRDMLKAIAPHSLLKCSSDATTLGIRVQVKSVYIEGRSQPSEEVYFFEYRIRITNNTNRPVQLLRRHWIISDANGKTENLWGIGVVGEQPAIFPRSSFEFSSTCPLNTQNGRMEGDFEMIHVDRVGSRAFNVAVAPFSLSLLGDGDGETT 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02019 275 Coils Coil 81 101 - -
Pumo10g02019 275 Gene3D ApaG domain 140 269 IPR036767 -
Pumo10g02019 275 ProSiteProfiles UVR domain profile. 101 136 IPR001943 GO:0005515
Pumo10g02019 275 Pfam UvrB/uvrC motif 106 133 IPR001943 GO:0005515
Pumo10g02019 275 ProSiteProfiles ApaG domain profile. 144 271 IPR007474 -
Pumo10g02019 275 ProSiteProfiles UVR domain profile. 66 101 IPR001943 GO:0005515
Pumo10g02019 275 PANTHER OS05G0170800 PROTEIN 25 270 - -
Pumo10g02019 275 Pfam ApaG domain 162 245 IPR007474 -
Pumo10g02019 275 SUPERFAMILY ApaG-like 146 265 IPR036767 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02019 Pumo-Chr10 26634703 26637971 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02019 - K06195 gmx:100799029 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02019 10 26634703 26637971 Pumo10g02019 10 26634703 26637971 ECH
Pumo4g01422 4 18007207 18011283 Pumo10g02019 10 26634703 26637971 PCT