Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01861 ATGGGGGAGGAGGACAAGAAACCAGAGGAATCCAAGGCAGAGGAAGAGAAAAAGACAGAAGAGAAGAAGAAAGAAGAAGCAGCGGAAAAACCGGCCGAAGAGAAAAAACCAGAACAAGAGTCCAAAGAGGAGGTTGCTGCTCCACCACCACCACCGCCACCGCCCGAGATTGTGCTCAAAGTGTTCATGCATTGTGAGGGTTGCGCTCGCAAGGTTCGTCGTTCCCTCAAAGGATTCCCAGGTGTCGACGATGTTGTCACCGATTGCAAATCTCACAAGGTAGTCGTTAAGGGAGAGAAAGCGGATCCGCTGAAGGTCTTGGAGAGAATACAGAGGAAGAGTCACAGACAGGTCCAGCTTCTTTCTCCGATCCCGAAGCCGCAAGAGGAGAAGAAGGTCCAAGAGGAAGAGAAGCCCAAGCCCAAACCCGAAGAGAAGAAAGAAGAGCCTCAGATTATTCTGACGGTTCTGAAAGTTCACATGCATTGCGAAGCTTGTTCTCAGGAAATTAAGAGACGCATACAGAGAATGAAGGGAGTGGAATCAGCTGAACCCGATCTGAAGAACTCACAAGTGAGCGTGAAGGGGGTGTATGATCCAGCGAAGTTGGTTGAGTACTTGTACAAGAGAACCGGGAAGCACGCAGTGATAGTGAAGCAAGAGCCAGAAAAGAAGGAGAAAGTGGAGGAAGCTGCAGCAAAAGAGGAGAAGAAAGAAGAGGGTGAGAAAGAGAAGAAGAGTGGTGAAGGTGAAGAAAACAAAGAGAAGAAGGAAGAAGAAACAAAGGGTGAGACCAAAGCAGAGGAAGCAGCAGCAACCACTGAAGACACCAACAAGGTGGTGGTTCCAGAGGTGAAGATAAATGAATACTTCTATAACCCACCAAGGTATGGCATGGAGGTGTATGCATATCCTACACACCCTGCACACGCTGCTGAGTATTTCCATTCGTACCCACCACAGATGTTCAGCGATGAGAACCCAAATGCCTGCACTGTCATGTAA 1005 0.4866 MGEEDKKPEESKAEEEKKTEEKKKEEAAEKPAEEKKPEQESKEEVAAPPPPPPPPEIVLKVFMHCEGCARKVRRSLKGFPGVDDVVTDCKSHKVVVKGEKADPLKVLERIQRKSHRQVQLLSPIPKPQEEKKVQEEEKPKPKPEEKKEEPQIILTVLKVHMHCEACSQEIKRRIQRMKGVESAEPDLKNSQVSVKGVYDPAKLVEYLYKRTGKHAVIVKQEPEKKEKVEEAAAKEEKKEEGEKEKKSGEGEENKEKKEEETKGETKAEEAAATTEDTNKVVVPEVKINEYFYNPPRYGMEVYAYPTHPAHAAEYFHSYPPQMFSDENPNACTVM 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01861 334 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 35 334 IPR044577 GO:0046872
Pumo10g01861 334 ProSiteProfiles Heavy-metal-associated domain profile. 54 118 IPR006121 GO:0046872
Pumo10g01861 334 Coils Coil 224 245 - -
Pumo10g01861 334 MobiDBLite consensus disorder prediction 115 149 - -
Pumo10g01861 334 Gene3D - 151 218 - -
Pumo10g01861 334 ProSiteProfiles Heavy-metal-associated domain profile. 152 216 IPR006121 GO:0046872
Pumo10g01861 334 SUPERFAMILY HMA, heavy metal-associated domain 154 217 IPR036163 GO:0046872
Pumo10g01861 334 SUPERFAMILY HMA, heavy metal-associated domain 58 113 IPR036163 GO:0046872
Pumo10g01861 334 MobiDBLite consensus disorder prediction 1 58 - -
Pumo10g01861 334 Pfam Heavy-metal-associated domain 157 208 IPR006121 GO:0046872
Pumo10g01861 334 Pfam Heavy-metal-associated domain 59 113 IPR006121 GO:0046872
Pumo10g01861 334 MobiDBLite consensus disorder prediction 221 277 - -
Pumo10g01861 334 CDD HMA 63 118 IPR006121 GO:0046872
Pumo10g01861 334 Gene3D - 54 126 - -
Pumo10g01861 334 MobiDBLite consensus disorder prediction 128 149 - -
Pumo10g01861 334 MobiDBLite consensus disorder prediction 1 43 - -
Pumo10g01861 334 MobiDBLite consensus disorder prediction 44 58 - -
Pumo10g01861 334 Coils Coil 10 30 - -
Pumo10g01861 334 CDD HMA 156 215 IPR006121 GO:0046872
Pumo10g01861 334 MobiDBLite consensus disorder prediction 221 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01861 Pumo-Chr10 24591430 24593241 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01861 - - gmx:100787932 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01861 10 24591430 24593241 Pumo10g01861 10 24591430 24593241 ECH
Pumo6g00539 6 6707872 6709979 Pumo10g01861 10 24591430 24593241 PCT