Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01814 ATGGAGGGTGTGAGCCCTGAGCCTGAGCCCCTGAGATCAGAATTCGATTCCAAATCCAAACATGACACTGCAAAAGAAGAAGATGATGACGCATTGAAAGACAGCACTGACGCCGAGGTCACCAAAATTCGTCTCATGAGAGCCTTTGTTGAAACCCGAGATCCCTCTTCTAAGGAAGTAGATGATTTGATGATTAGGAGATTCTTGCGGGCTCGTAGTTTAGATGTGGAGAAGGCTTCGGCAATGTTCCTTAAGTACTTGAAATGGAAACGTTCATTTGTTCCAAATGGTTACATATCACTGTCCGAGATTGCCGAAGATATTGCACAGAACAAGGTGTTTGCGCAAGGGCTCGACAAGAAGGGTCGACCTATAGTTGTTGCCTTTGCTGCAAAACATTTTCAAAGCAAAAATGGTGCCGATGGTTTCAAACGGTACGTAGTCTTTGTTCTTGAGAAGCTTTGTTCAAGGATGCCACCGGGGCAAGAAAAGTTTCTTGCCATTGCAGACATTAAAGGATGGGCATATGCAAACAGTGACCTTCGTGGATACCTTAATGCTCTATCCATTTTGCAGGATTGCTACCCTGAAAGATTGGGGAAGATGTTTATTGTACATGCACCTTATATGTTTATGAAAATTTGGAAAATGATTTACCCTTTCATTGATGACAATACCAAGAAAAAGATAGTATTCGTGGAGACCAAAAAGCTGAAATCAACATTGCTGGAAGAGATAGAGGAGAGTCAAATCCCAGATATATACGGAGGCCAAATGCCATTAGTTCCTATCCAGGATAGCTGA 804 0.4254 MEGVSPEPEPLRSEFDSKSKHDTAKEEDDDALKDSTDAEVTKIRLMRAFVETRDPSSKEVDDLMIRRFLRARSLDVEKASAMFLKYLKWKRSFVPNGYISLSEIAEDIAQNKVFAQGLDKKGRPIVVAFAAKHFQSKNGADGFKRYVVFVLEKLCSRMPPGQEKFLAIADIKGWAYANSDLRGYLNALSILQDCYPERLGKMFIVHAPYMFMKIWKMIYPFIDDNTKKKIVFVETKKLKSTLLEEIEESQIPDIYGGQMPLVPIQDS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01814 267 SMART CRAL_TRIO_N_2 61 86 IPR011074 -
Pumo10g01814 267 MobiDBLite consensus disorder prediction 1 36 - -
Pumo10g01814 267 SUPERFAMILY CRAL/TRIO domain 103 260 IPR036865 -
Pumo10g01814 267 SUPERFAMILY CRAL/TRIO N-terminal domain 17 97 IPR036273 -
Pumo10g01814 267 SMART sec14_4 106 260 IPR001251 -
Pumo10g01814 267 Pfam CRAL/TRIO domain 111 257 IPR001251 -
Pumo10g01814 267 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 101 263 IPR001251 -
Pumo10g01814 267 CDD SEC14 113 258 IPR001251 -
Pumo10g01814 267 Gene3D - 4 266 IPR036865 -
Pumo10g01814 267 MobiDBLite consensus disorder prediction 7 36 - -
Pumo10g01814 267 PANTHER OS03G0850700 PROTEIN 33 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01814 Pumo-Chr10 23809748 23812678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01814 67 230 Acyl Lipid Metabolism Gene Families AT1G55840 25.668 4.75e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01814 - - gmx:100797666 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01814 10 23809748 23812678 Pumo10g01814 10 23809748 23812678 ECH
Pumo6g00579 6 7370071 7377018 Pumo10g01814 10 23809748 23812678 PCT