Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00106 ATGCACGCAATTATCTGGCGAACAAATGTTGAATGGCATGCTCCTATGGTCCCGGGCGAAGATATATTTTCTAAGCGCTTGGTCAAGTCTGTCATCCGTGGTTTTGATGGCGACGTATGGATTAAGGAATGTCAACTTGGCCGCGGGAATTTTCCTTGCAAAAGGGACACTATCCTCGCTAACCCCCAATGGGCCAATGTGGGCATGGCAAATTTGGTTAGTGTCAAGAATCAAGACAAGGAAGTGTATAAGAAGAACAATAACTGCAAACTAAAGCAAAAGCATCTCCACGTTCCCGTGTTCTTCTCATCTGAGCACGTCATGTCCTCCTTTTCCACTCTCCGGAGATTCTCACTGTTCACCCAACGCTTCCGTACCCTTCACTCTTCAACTTCCCAATCTTCCTCCCCTGCCAATCCACATCACAATCCCAAGTGCCAGTGGGGTTCAGCCATTGTTGTAGCCTCTGCTCTTGCCCTTTTGTACAGCTTCACCACGCCCAATTCACACTTCGACCTCTCAAACAGTGCCCCTCGCAGTTCTTCATCGCCATTGTCTGGAAAATCATCCCTTCCAGAAAATGCGTATAGAAGTAAGGTTTTCTTCAACTATGAGAAGCGCCTACGGTTGCATAGTCCACCCGAAAAGGTTTTTGAATACTTTGCATCTTGTCGTACTCCAGAAGGAGAATTACTGATGAAGCCAGTGGACCTAATGCGGGCAGTTGTTCCTGTTTTCCCTCCATCGGAATCCAACCTTGTAAGAGAGGGATACTTGAAAGGTGAAAGAAGTCCTAGCCATTTGTGCTGTCCCCCTTCGGAATTTTTTATGCTTTTTGATGTAGACAATGACGAGCTTATATCTTTCAAAGAGTGA 876 0.4623 MHAIIWRTNVEWHAPMVPGEDIFSKRLVKSVIRGFDGDVWIKECQLGRGNFPCKRDTILANPQWANVGMANLVSVKNQDKEVYKKNNNCKLKQKHLHVPVFFSSEHVMSSFSTLRRFSLFTQRFRTLHSSTSQSSSPANPHHNPKCQWGSAIVVASALALLYSFTTPNSHFDLSNSAPRSSSSPLSGKSSLPENAYRSKVFFNYEKRLRLHSPPEKVFEYFASCRTPEGELLMKPVDLMRAVVPVFPPSESNLVREGYLKGERSPSHLCCPPSEFFMLFDVDNDELISFKE 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00106 291 ProSiteProfiles EF-hand calcium-binding domain profile. 274 291 IPR002048 GO:0005509
Pumo10g00106 291 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 131 291 IPR039800 GO:0005509|GO:0006851
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00106 Pumo-Chr10 1738463 1741666 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00106 146 291 EF-hand Containing Proteins AT4G32060 57.225 5.84e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00106 K22827 - gmx:100786375 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00106 10 1738463 1741666 Pumo10g00106 10 1738463 1741666 ECH
Pumo9g00609 9 10445251 10452331 Pumo10g00106 10 1738463 1741666 PCT