Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01131 ATGGGTACCAGATACAATCCTGTTTCAGTAACTCTTTTCATTTGCTTGCTTCTCCTTCCTGCTGTCTTTGGTGACTCCGATGGTGGGTTGACTAGAGTTTGGCTTAAGAAAAAGAAGCTCGATTTGAACAACTTCCTTGCGGGTAATATTGACTCTAAAGAAGGAGAAGTTTCAACGAGGCTCATTCGAAGATATAGATCCTATATAAAATCGTGCGATTCAAAGGATATTGACATTGTGTCACTCAAAAATTACATGGATGCTCAATATTTTGGTGAGATCGGCATCGGTACTCCTCCACAGAAGTTCACTGTGATATTCGACACAGGGAGCTCTAATCTGTGGGTGCCATCTTCAAAGTGTTATTTCTCGGTTGCTTGCCACTTTCACTCCAAATACAAGTCAAGGCAATCGAGTACTTATCAAAAGAATGGTAAATCAGCGGCAATACATTATGGAACTGGTGCAATTTCTGGATTCTTCAGTCAAGACCATGTGAAAATTGGCGGTCTTGTCGTCAAGAGTCAGGACTTTATCGAGGCAACAAGGGAGCCCAGTGTCACATTCTTGGTAGCTAAGTTTGATGGCATCCTTGGACTTGGATTCCAAGAGATTTCAGTGGGAGATGCTGTACCAATTTGGTACAACATGGTTAATCAGAGTCTTCTGAAAAAACCAGTTTTCTCATTTTGGCTTAACCGTGATGCATATGATTCGCATGGAGGTGAAATTGTTTTTGGTGGAATGGATCCTAACCATTACAAGGGTGAACACACATATGTGCCAGTCACGCAGAAAGGCTATTGGCAGTTTGACATGGGTGATGTATTGATTGATGGTAAAACAACTGGATTTTGTACTGGTGGCTGTTCAGCAATTGCTGATTCTGGAACCTCTATGTTGGCTGGCCCAACGTCCATTATTACTGAAGTTAATCATGCAATTGGAGCTTCAGGGGTTGTCAGTCAAGAGTGCAAATCCGTAGTTGCTGAGTATGGGAAAACTATCATTCAAATGCTTCTAGCAAAGGATGAACCCAAAAAGATATGCTCACAAATTGGTTTATGCACTTTTGATGGCCAGAAAGGAGTGAATGCTGGTATTAAGAGCATTGTGGATGAAGATGGAACCTCAGATGGCTACAATAATGGAAAGCGTGATGCGATGTGCTCTACTTGTGAAATGGCAGTTGTATGGATGCAAAATCAGCTTAAGCGGAACCAAACACAGGAGCATATAATTGACTATGTCAATGAGCTTTGCAATCGGTTGCCTAGTCCAATGGGAGAATCAGCTGTTGACTGTAACAGTTTGTCTTCACTGCCCAATGTTTCCTTCAGTGTTGGTGGGAAGATATTCAACCTTACACCTCAACAGTATGTTCTTAAAGTGAGTGAAGGTGATATAGCTCAATGCATCAGTGGTTTCACAGCTTTGGACGTGCCTCCTCCACGTGGACCACTCTGGATCTTGGGTGATATTTTCATGGGTGCTTACCACACAGTGTTTGACTATGGCAATGCGAGAATCGGTTTTGCTGAAGCAGGGTGA 1551 0.4249 MGTRYNPVSVTLFICLLLLPAVFGDSDGGLTRVWLKKKKLDLNNFLAGNIDSKEGEVSTRLIRRYRSYIKSCDSKDIDIVSLKNYMDAQYFGEIGIGTPPQKFTVIFDTGSSNLWVPSSKCYFSVACHFHSKYKSRQSSTYQKNGKSAAIHYGTGAISGFFSQDHVKIGGLVVKSQDFIEATREPSVTFLVAKFDGILGLGFQEISVGDAVPIWYNMVNQSLLKKPVFSFWLNRDAYDSHGGEIVFGGMDPNHYKGEHTYVPVTQKGYWQFDMGDVLIDGKTTGFCTGGCSAIADSGTSMLAGPTSIITEVNHAIGASGVVSQECKSVVAEYGKTIIQMLLAKDEPKKICSQIGLCTFDGQKGVNAGIKSIVDEDGTSDGYNNGKRDAMCSTCEMAVVWMQNQLKRNQTQEHIIDYVNELCNRLPSPMGESAVDCNSLSSLPNVSFSVGGKIFNLTPQQYVLKVSEGDIAQCISGFTALDVPPPRGPLWILGDIFMGAYHTVFDYGNARIGFAEAG* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01131 516 ProSiteProfiles Saposin B type domain profile. 320 360 IPR008139 -
Pte9g01131 516 Pfam Eukaryotic aspartyl protease 89 515 IPR033121 -
Pte9g01131 516 FunFam Vacuolar aspartic proteinase 384 515 - -
Pte9g01131 516 Gene3D Acid Proteases 249 515 IPR021109 -
Pte9g01131 516 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 292 303 IPR001969 GO:0004190|GO:0006508
Pte9g01131 516 Pfam Saposin-like type B, region 1 389 425 IPR007856 GO:0006629
Pte9g01131 516 Pfam Saposin-like type B, region 2 323 356 IPR008138 -
Pte9g01131 516 CDD phytepsin 80 514 IPR033869 GO:0004190
Pte9g01131 516 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 105 116 IPR001969 GO:0004190|GO:0006508
Pte9g01131 516 Gene3D - 320 425 - -
Pte9g01131 516 SUPERFAMILY Acid proteases 64 515 IPR021109 -
Pte9g01131 516 SUPERFAMILY Saposin 321 425 IPR011001 -
Pte9g01131 516 FunFam Lysosomal aspartic protease 76 318 - -
Pte9g01131 516 Gene3D Acid Proteases 31 248 IPR021109 -
Pte9g01131 516 FunFam Aspartic proteinase A1 320 425 - -
Pte9g01131 516 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 66 514 IPR001461 GO:0004190|GO:0006508
Pte9g01131 516 ProSiteProfiles Peptidase family A1 domain profile. 90 513 IPR033121 -
Pte9g01131 516 ProSiteProfiles Saposin B type domain profile. 386 427 IPR008139 -
Pte9g01131 516 PRINTS Pepsin (A1) aspartic protease family signature 96 116 IPR001461 GO:0004190|GO:0006508
Pte9g01131 516 PRINTS Pepsin (A1) aspartic protease family signature 242 255 IPR001461 GO:0004190|GO:0006508
Pte9g01131 516 PRINTS Pepsin (A1) aspartic protease family signature 292 303 IPR001461 GO:0004190|GO:0006508
Pte9g01131 516 PRINTS Pepsin (A1) aspartic protease family signature 489 504 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01131 Pte-Chr9 33048137 33056187 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01131 K08245 - jre:108984384 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01131 9 33048137 33056187 Pte9g01131 9 33048137 33056187 RCT
Pte9g01131 9 33048137 33056187 Pte2g00438 2 3401424 3405610 RCT