Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00342 ATGGCCAACGCAGCATCTGGAATGGCGGTTCACGATGATTGCAAACTGAAGTTCTTGGATCTGAAAGCGAAAAGGAGCTACCGATTCATTATCTTCAAGATCCAGAATCAACAGGTGGTGGTGGAGAAATTGGGGAGCCAAGATGAAACTTATGAAGATTTTACTAATTCTCTGCCTCCTGATGAATGCCGTTATACTGTCTTTGATTTCGATTTCACCACGGTAGAGAATTGTCAGAAAAGCAAGATCTTCTTCATTGCATGGTCACCTGATACATCTAATGTGAGAATGAAGATGGTGTATGCTAGCTCTAAGGACAGGTTCAAGAGGGAACTCGATGGCATTCAAGTTGATTTGCAGGCAACTGATCTCAGTGAAATGAGCCTTGATATTATAAAAAGCCGCGCATTTTAA 414 0.4179 MANAASGMAVHDDCKLKFLDLKAKRSYRFIIFKIQNQQVVVEKLGSQDETYEDFTNSLPPDECRYTVFDFDFTTVENCQKSKIFFIAWSPDTSNVRMKMVYASSKDRFKRELDGIQVDLQATDLSEMSLDIIKSRAF* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00342 137 FunFam Actin-depolymerizing factor 2 1 137 - -
Pte9g00342 137 Gene3D Severin 1 134 IPR029006 -
Pte9g00342 137 ProSiteProfiles ADF-H domain profile. 5 137 IPR002108 GO:0003779
Pte9g00342 137 PANTHER COFILIN-RELATED 2 136 IPR017904 GO:0015629|GO:0030042
Pte9g00342 137 CDD ADF_cofilin_like 6 136 IPR017904 GO:0015629|GO:0030042
Pte9g00342 137 Pfam Cofilin/tropomyosin-type actin-binding protein 14 134 IPR002108 GO:0003779
Pte9g00342 137 SUPERFAMILY Actin depolymerizing proteins 3 135 - -
Pte9g00342 137 SMART adf_2 12 137 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00342 Pte-Chr9 4045622 4046769 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00342 K05765 - sly:101265034 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00272 16 3642275 3642807 Pte9g00342 9 4045622 4046769 RCT
Pte9g00342 9 4045622 4046769 Pte9g00342 9 4045622 4046769 RCT