Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00309 ATGCGTGCAGGAGATCCTGAAAGAGGTGGAAGTAGTGTTGCGTTGAAGAACAGACCAAACAACAATTACCCACCCCCAACAAGTTCATATCTGCGTGAGGACGTCCAATGGACTTCTTGGTTGGTTCCTGTCTTTGCGGTGGCTAATGTTGCTGTTTTTGTTGTTCTGATGTACATAAACAATTGTCCAAGGAACAATTCGCGCGTTTATGGCAACTGTGTAGCAAGGTCCCTTGGGAGGTTTTCCTTTGAGCCTTGGAGGGAAAATCCGTTGCTTGGCCCTTCTGCTGACACATTGTTGAAGATGGGAGGTCTTAAGTGGTCTAATGTCGTGGACAAACATCAGGCATGGAGACTTGTCACTTGCATGTGGTTGCATGCTGGACTTCTCCATATGGTTGTAAATACGCTGAGCCTAGTCTTCATTGGAGTGCGTTTGGAACAGCAATTTGGTTGTGTGAGGATTGGAACCATCTACTTATTATCTGGAATTGGGAGCTCTGTGCTTTCATCATTGTTTCTTAGAAACGGAATTTCTGTGGGTGCATCTGGTTCCCTCTTTGGACTTCTAGGAGCAATGCTTTCAGAACTTCTCACAAATTGGTCTATTTATACCAATAAGGTTGCAGCATTGCTGACCCTTGTGTTTGTCGTTGTGATTAACCTTGGGGTTGGTATCTTGCCACATGTTGATAACTTAGCCCACATTGGAGGCTTTTTGACAGGTTTTCTCCTTGGTTTTATTTTGCTCCCTCGGCCTCAGTTTGGTTGGCTTGCGCAAAAGCATGTTCCTGCTGGCGTCCATCTCAGATCAAAGTACAAAGTGTATCAATATGTACTTTGGGTGGTTTCTCTAATTCTGTTGGTTGGCGGGTTAAGTGTTGGATTGGTGATGCTCTTCCGAGGGGTAAATGGGAACGATCATTGCCATTGGTGTCATTACTTAAGCTGTGTCCCTACCAGTAAGTGGAAATGTGACAATTAA 984 0.4472 MRAGDPERGGSSVALKNRPNNNYPPPTSSYLREDVQWTSWLVPVFAVANVAVFVVLMYINNCPRNNSRVYGNCVARSLGRFSFEPWRENPLLGPSADTLLKMGGLKWSNVVDKHQAWRLVTCMWLHAGLLHMVVNTLSLVFIGVRLEQQFGCVRIGTIYLLSGIGSSVLSSLFLRNGISVGASGSLFGLLGAMLSELLTNWSIYTNKVAALLTLVFVVVINLGVGILPHVDNLAHIGGFLTGFLLGFILLPRPQFGWLAQKHVPAGVHLRSKYKVYQYVLWVVSLILLVGGLSVGLVMLFRGVNGNDHCHWCHYLSCVPTSKWKCDN* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00309 327 MobiDBLite consensus disorder prediction 1 27 - -
Pte9g00309 327 FunFam RHOMBOID-like protein 35 252 - -
Pte9g00309 327 Pfam Rhomboid family 112 253 IPR022764 GO:0004252|GO:0016020
Pte9g00309 327 SUPERFAMILY Rhomboid-like 37 254 IPR035952 -
Pte9g00309 327 Gene3D - 34 252 IPR035952 -
Pte9g00309 327 PANTHER RHOMBOID-RELATED 20 325 IPR002610 GO:0004252|GO:0006508|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00309 Pte-Chr9 3418273 3421652 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00309 - - qsa:O6P43_005564 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00248 16 3031664 3035476 Pte9g00309 9 3418273 3421652 RCT
Pte9g00309 9 3418273 3421652 Pte9g00309 9 3418273 3421652 RCT