Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00248 ATGTCTGCTGGCGATCTGGAAAGAGGTGGTAATGGTAGTGGGTTGAAGAACAGAGTGAATAACAGTTCTTACGTGATTGAGGAATCAGAGAACCAATGGACATCTTGGTTGGTTCCCATGATTGTGGTAGCTAATGTTGCTGTTTTCATTGTGGTGATGTACATCAACGATTGTCCAAGGAACAATATCGGCTTTGAAGGCAGCTGCGTGGCAAGGTTCCTAGGGAGGCTCTCTTTTGAGCCTTTAAGGGAAAATCCATTGTTTGGGCCCTCTGCTGACACGTTGGTGAAGCTTGGAGCTCTCAAGTGGTCAAATGTCGTGGACAAACATCAGGCTTGGAGGCTCATTACCTGCATCTGGTTGCATGCTGGAATTATTCATCTGGCTGCAAATATGCTGAGCTTGGTCTTCATAGGAATCCGTCTTGAACAGCAATTTGGTTTCGTGAGGATTGGACTAATTTACCTGTTATCTGGAATTGGTGGTTCTGTACTCTCATCATTGTTTATTAGAAATGGAATTTCGGTTGGGGCATCTGGTGCGCTTTTTGGACTTCTTGGAGCCATGCTTTCAGAACTTTTTACAAACTGGACTATTTATACCAACAAGGCTGCAGCATTAATCACCCTCCTGTTCATCATTGTGATTAACCTCGGCATTGGAATCTTGCCACATGTTGATAACTTTGCTCACATAGGAGGATTCCTTACTGGTTTTCTGCTTGGATTTGTTTTGCTCCCCCGTCCTCAGTTCGGTTGGCTCGAGCAAAGGCATCTTCGTGCTGTTGTAGGTCTCAGATCAAAATACAAAGCTTACCAATATGTGCTTTGGATTGTTTCTCTAATTCTGCTGATTGCTGGGTTAACTGTTGGATTAGTGATGCTTTTCAAAGGCGAAAATGGCAACGATCACTGCCACTGGTGTCACTACCTGAGCTGTGTCCCAACCAGCAGATGGAAATGTGATAATTAG 972 0.4424 MSAGDLERGGNGSGLKNRVNNSSYVIEESENQWTSWLVPMIVVANVAVFIVVMYINDCPRNNIGFEGSCVARFLGRLSFEPLRENPLFGPSADTLVKLGALKWSNVVDKHQAWRLITCIWLHAGIIHLAANMLSLVFIGIRLEQQFGFVRIGLIYLLSGIGGSVLSSLFIRNGISVGASGALFGLLGAMLSELFTNWTIYTNKAAALITLLFIIVINLGIGILPHVDNFAHIGGFLTGFLLGFVLLPRPQFGWLEQRHLRAVVGLRSKYKAYQYVLWIVSLILLIAGLTVGLVMLFKGENGNDHCHWCHYLSCVPTSRWKCDN* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00248 323 PANTHER RHOMBOID-RELATED 28 321 IPR002610 GO:0004252|GO:0006508|GO:0016020
Pte16g00248 323 Gene3D - 28 248 IPR035952 -
Pte16g00248 323 FunFam RHOMBOID-like protein 31 248 - -
Pte16g00248 323 Pfam Rhomboid family 108 249 IPR022764 GO:0004252|GO:0016020
Pte16g00248 323 SUPERFAMILY Rhomboid-like 33 250 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00248 Pte-Chr16 3031664 3035476 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00248 - - qsa:O6P43_005564 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00248 16 3031664 3035476 Pte9g00309 9 3418273 3421652 RCT
Pte16g00248 16 3031664 3035476 Pte16g00248 16 3031664 3035476 RCT