Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00294 ATGACTTGTGATTGCTCCTGCGAATGCAACTACCTTATCTCAATAAAAGAGACAGAGGAGCTAAACACACTCAGCAACCCGTTGATCCCCAAAAGCCCCACAACCCTTGAAGAAAAACATGTTCCATACCAAACCCAGAAACCCCATATTTCTCTTGCCATTAGAGAAACCAAAGCTATCGCCAAAATAGCCATGCCCACGATACTCACTAGTCTACTTCTGTACTGTCGTTCAATGATCTCCATGCTCTTTCTCGGTAGACTTGGGGAGCTGGCCTTAGCTGGAGGCTCCTTAGCTCTTGGCTTTGCTAACATCACTGGTTATTCAATTCTATCAGGCCTTGCCATGGGAATGGAGCCAATCTGTGGACAAGCTTTTGGTGCTAAAAGGAATACCCTTATTGGTTTATGCTTGCAGAGAACTATTCTGCTTCTCATCTTCAGTTCCATACCCATCTCTCTTCTCTGGCTCTATATGAAGAACATCCTTCTCTTCTGTGGTCAAAATGAAGCCATAGCCACACAAGCCCAATCATATCTTCTCAACTCTCTTCCTGACCTCTTAGCTCAATGTTTTCTTCATCCATTGAGAATTTACCTTAGGACTCAATCCATAACTCTCCCTGTAACATTCTGTGCAGCCTTTTCAATCCTTCTTCATCTTCCTATCAGTTATCTCTTGTGTTCGCACCTCAAGTTAGGAATCAAAGGTGTTGCTCTCAGCGGTGTCTGCACTAACTTCATACTCGTAGCTTCTTTGATACTGTATATTACAGTGTGTGGCATTCATAAGAGAACTTGGGGAGGTTTTTCAATTGAGTGCTTCACTCAATGGAGAGCACTTCTGGATTTGGCCATTCCAAGCTGTGTATCTGTCTGCCTTGAATGGTGGTGGTACGAGATCATGATTTTGCTATGCGGTCTGCTGTTGAATCCCGAGGCAACAGTGGCTTCAATGGGGATTTTGATTCAAACCACTTCTCTAATCTACATTTTCCCATCATCTCTGAGCTTCAGTGTATCAACCAGAGTCAGCAACAAACTCGGTGCAAACCAACCTTCAAGAGCTAAGCTTTCTGCCATTGTAGGACTTGCTTGCAGCTTTGTGCTTGGATTTTCAGCACTGTGCTTTGCTGTCATGGTTAGCCACAGCTGGGCTGGCATGTTCTCCGAAGATCAAGACATCATTAGTCTGACATCAATGGTTTTACCGATAATTGGGACTATGTGA 1230 0.4398 MTCDCSCECNYLISIKETEELNTLSNPLIPKSPTTLEEKHVPYQTQKPHISLAIRETKAIAKIAMPTILTSLLLYCRSMISMLFLGRLGELALAGGSLALGFANITGYSILSGLAMGMEPICGQAFGAKRNTLIGLCLQRTILLLIFSSIPISLLWLYMKNILLFCGQNEAIATQAQSYLLNSLPDLLAQCFLHPLRIYLRTQSITLPVTFCAAFSILLHLPISYLLCSHLKLGIKGVALSGVCTNFILVASLILYITVCGIHKRTWGGFSIECFTQWRALLDLAIPSCVSVCLEWWWYEIMILLCGLLLNPEATVASMGILIQTTSLIYIFPSSLSFSVSTRVSNKLGANQPSRAKLSAIVGLACSFVLGFSALCFAVMVSHSWAGMFSEDQDIISLTSMVLPIIGTM* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00294 409 CDD MATE_eukaryotic 56 407 IPR045069 GO:0042910|GO:1990961
Pte9g00294 409 Pfam MatE 66 226 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte9g00294 409 Pfam MatE 287 407 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte9g00294 409 NCBIfam MATE family efflux transporter 66 407 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte9g00294 409 PANTHER MULTIDRUG RESISTANCE PROTEIN 53 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00294 Pte-Chr9 3272650 3273879 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00294 K03327 - qsa:O6P43_008262 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00223 16 2784809 2786155 Pte9g00294 9 3272650 3273879 RCT
Pte9g00294 9 3272650 3273879 Pte9g00294 9 3272650 3273879 RCT