Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01368 ATGAGCTTCAGGGAGGATAATGATGAGGGAAGGGACCTCAATAAACCTTTCCTTAACACGGGAAGCTGGTATCGGATGGGTTCAAGGCAATCCAGTTTGATGGGTTCTTCTCAGATCATTCGTGATAGCTCCATCTCTGTTGTTGCCTGCGTTCTTATTGTGGCTCTGGGGCCGATACAGTTCGGTTTCACTTCTGGGTATTCTTCTCCTACTCAATCTGAAATCATCAGTGATCTCGGGTTGACTGTCTCAGAGTTTTCTGTCTTTGGTTCTTTAAGTAACGTGGGTGCCATGATTGGAGCAATAGCTAGTGGTCAGATTGCCGAGTATATTGGGCGAAAAGGGTCGTTAATGATTGCCTCTGTCCCTAATGTCATTGGTTGGCTTGTCATATCGTTTGCAAAAGATCCTTCATTTCTCTACATGGGACGTTTACTGGAAGGATTTGGAGTCGGAGTTATATCATACACGGTGCCAGTATACATAGCTGAGATAGCACCTCAGAAATTGAGAGGAAGTCTTGGTTCAGTTAACCAGCTCTCCGTGACCATTGGAATCATGCTGGCGTATCTACTGGGACTATTTGTTCCATGGAGAATACTCGCCGTCCTTGGCATTTTGCCATGTACTATTTTAATTCCGGCTCTTTTTTTCATTCCGGAATCTCCAAGATGGCTGGCCAAAATGGGTATGACAGAAGAATTTGAAACCTCACTGCAAGTGCTCCGAGGCTTTGAGACTGATATTTCTATTGAAGTGAATGAAATTAAGAGGTCAGTGGCATCAACAAGCAGAAGAACTACTATAAGATTTGGTGACTTGAAGCGGAGAAGATATTGGTTTCCTTTAATGATTGGAAACGGATTGCTCGTTTTGCAACAGCTTAGTGGAATTAATGGTGTTCTATTCTACTCCAGTACCATCTTTGAAGCTGCTGGGATCAAATCAGGGAGTAGTCTTACATTAGGACTTGGTGCTCTTCAGGTCATTGCTACTGCATTAACTTTATGGCTGGTTGA 1019 0.4347 MSFREDNDEGRDLNKPFLNTGSWYRMGSRQSSLMGSSQIIRDSSISVVACVLIVALGPIQFGFTSGYSSPTQSEIISDLGLTVSEFSVFGSLSNVGAMIGAIASGQIAEYIGRKGSLMIASVPNVIGWLVISFAKDPSFLYMGRLLEGFGVGVISYTVPVYIAEIAPQKLRGSLGSVNQLSVTIGIMLAYLLGLFVPWRILAVLGILPCTILIPALFFIPESPRWLAKMGMTEEFETSLQVLRGFETDISIEVNEIKRSVASTSRRTTIRFGDLKRRRYWFPLMIGNGLLVLQQLSGINGVLFYSSTIFEAAGIKSGSSLTLGLGALQVIATALTLWLV 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01368 339 Pfam Sugar (and other) transporter 51 339 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pte3g01368 339 ProSitePatterns Sugar transport proteins signature 1. 104 121 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pte3g01368 339 PRINTS Sugar transporter signature 58 68 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pte3g01368 339 PRINTS Sugar transporter signature 141 160 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pte3g01368 339 PRINTS Sugar transporter signature 293 303 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pte3g01368 339 PANTHER - 38 339 - -
Pte3g01368 339 Gene3D MFS general substrate transporter like domains 41 339 IPR036259 -
Pte3g01368 339 SUPERFAMILY MFS general substrate transporter 51 338 IPR036259 -
Pte3g01368 339 ProSitePatterns Sugar transport proteins signature 2. 146 171 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pte3g01368 339 ProSiteProfiles Major facilitator superfamily (MFS) profile. 50 339 IPR020846 GO:0022857
Pte3g01368 339 FunFam Sugar transporter ERD6-like 6 155 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01368 Pte-Chr3 11901517 11904465 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01368 1 339 Organic Solute Cotransporters AT1G75220 83.529 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01368 K03444 - qsa:O6P43_018580 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01368 3 11901517 11904465 Pte3g01368 3 11901517 11904465 RCT
Pte3g01368 3 11901517 11904465 Pte2g01244 2 13879531 13883259 RCT