Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01244 ATGAGCTTCAGGGACGACAGTGAAGAGGGAAAAGACGTCAAGAAACCTTTACTTCACACTGGAAGCTGGTACCGGCTGGGCTCCAGACAATCCAGTATGATGGGGTCTTCTCAGTCCATTCGTGACAGCTCTATCTCTGTTGTTGCCTGCGTTCTTATTGTAGCATTGGGTCCCATACAGTTTGGTTTCACTGCTGGTTATTCATCTCCAACTCAATCTGCAATCATCAAGGATCTCGGGCTGACAGTGTCAGAGTTTTCTTTGTTTGGCTCGTTATGTAATGTAGGTAGCATGATTGGAGCAATAGCCAGCGGTCAGATTGCCGAGTACATTGGTCGAAAAGGGTCGTTGATGATTGCCTCTATCCCTAATATCATTGGTTGGCTTACAATATCTTTGGCAAAAGATCATTCATTTCTCTACATGGGACGTTTGATGGAAGGATTTGGTGTCGGAATAATATCCTACACGGTGCCAGTATACATAGCTGAGATAGCACCTCAGAACTTGAGAGGAAGTCTTGGTTCCGTTAACCAGCTCTCAGTGACCATCGGAATTATGCTGGCTTACCTTCTGGGGCTTTTTGTTCAATGGAGAATCCTCGCCATCCTTGGAATTTTGCCATGTACAATATTAATACCGGGTCTATTTTTTATTCCGGAATCTCCAAGATGGCTGGCTAAAATGGGTATGACAGAAGAATTTGAAACTTCTCTGCAAGTTCTCCGAGGATTTGACTCTGACATCACCATTGAATTGAATGAAATTAAGAGATCTGTGGCATCAACAAGCAGAAGAACTACTATTAGATTTGCTGATTTGAAGCGAAGAAGATATTGGCTTCCTTTGATGATTGGAAATGGATTGCTCATGTTGCAACAGCTTAGTGGAATTAATGGTGTCCTGTTCTACTCCAGTACAATCTTTGAAGCTGCTGGGCTTAAATCCAGTAAAATCGCTACATTAGTACTCGGTGCTATTCAGGTACTCGCAACTGCTGTAACACTAAAGTTGGTTGACAAATTTGGCCGAAGGATTTTACTTGTTGTTTCTTCTGCTGGGATGACTGTTTGTCTCCTAGTTGTTGCCGTTTCCTTCTTTATTAAAGATTTCACATCTAGTGACTCTTCTCTACATGGGATTTTAAGCATCGTGTCAATAGTAGGAGTTCTGGCCATGGCTGTCACATTCTCTCTCGGACTTGGTGCCATTCCATGGGTCATAATGTCTGAGATTCTTCCAGTCAACCTTAAGGGGCTTGGTGGAAGTGTTGCAACGCTTGCCAATTGGTTTTGTTCATGGTTGGTTACAATGACAGCAAACTTGCTAATGAACTGGAGCCGAGGAGGTTTGATGCCCCTTTCCCTTATCTTTCTCAGTGAAAGCAATGGAAAGCTTTGA 1401 0.4311 MSFRDDSEEGKDVKKPLLHTGSWYRLGSRQSSMMGSSQSIRDSSISVVACVLIVALGPIQFGFTAGYSSPTQSAIIKDLGLTVSEFSLFGSLCNVGSMIGAIASGQIAEYIGRKGSLMIASIPNIIGWLTISLAKDHSFLYMGRLMEGFGVGIISYTVPVYIAEIAPQNLRGSLGSVNQLSVTIGIMLAYLLGLFVQWRILAILGILPCTILIPGLFFIPESPRWLAKMGMTEEFETSLQVLRGFDSDITIELNEIKRSVASTSRRTTIRFADLKRRRYWLPLMIGNGLLMLQQLSGINGVLFYSSTIFEAAGLKSSKIATLVLGAIQVLATAVTLKLVDKFGRRILLVVSSAGMTVCLLVVAVSFFIKDFTSSDSSLHGILSIVSIVGVLAMAVTFSLGLGAIPWVIMSEILPVNLKGLGGSVATLANWFCSWLVTMTANLLMNWSRGGLMPLSLIFLSESNGKL* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01244 466 PANTHER - 38 448 - -
Pte2g01244 466 ProSitePatterns Sugar transport proteins signature 1. 104 121 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pte2g01244 466 Gene3D MFS general substrate transporter like domains 40 461 IPR036259 -
Pte2g01244 466 PRINTS Sugar transporter signature 141 160 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pte2g01244 466 PRINTS Sugar transporter signature 293 303 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pte2g01244 466 PRINTS Sugar transporter signature 410 422 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pte2g01244 466 PRINTS Sugar transporter signature 58 68 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pte2g01244 466 PRINTS Sugar transporter signature 387 408 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pte2g01244 466 ProSitePatterns Sugar transport proteins signature 2. 146 171 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pte2g01244 466 FunFam sugar transporter ERD6-like 6 41 460 - -
Pte2g01244 466 NCBIfam sugar porter family MFS transporter 39 445 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pte2g01244 466 SUPERFAMILY MFS general substrate transporter 51 448 IPR036259 -
Pte2g01244 466 CDD MFS_GLUT6_8_Class3_like 50 452 IPR044775 GO:0008643|GO:0051119
Pte2g01244 466 ProSiteProfiles Major facilitator superfamily (MFS) profile. 50 466 IPR020846 GO:0022857
Pte2g01244 466 ProSitePatterns Sugar transport proteins signature 1. 335 352 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pte2g01244 466 Pfam Sugar (and other) transporter 51 450 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01244 Pte-Chr2 13879531 13883259 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01244 1 454 Organic Solute Cotransporters AT1G75220 78.022 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01244 K03444 - twl:119999717 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01244 2 13879531 13883259 Pte2g01244 2 13879531 13883259 RCT
Pte3g01368 3 11901517 11904465 Pte2g01244 2 13879531 13883259 RCT