Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte3g01356 | AAGCTAATTTCAGGTTCATGCTACCTTCCACATCCTGATAAAGAAGAAACTGGTGGAGAAGATGCACACTTCATCTGTGTGGATGAGCAAGCAATTGGGGTGGCCGATGGTGTTGGTGGGTGGGCAGAACTTGGTATTAATTCTGGTGAATACTCCCGGGAACTGATGGCTAATTCTGTGAATGCTATTAAAGAGGAGCCGAGAGGGTCTGTTGATCCTGCAAGGGTCCTGGAAAAAGCACATTTACAGACGAAAGCTATGGGCTCATCTACAGCATGTATCATCACCCTCACTGACCAGGGTCTACGTGCTATTAACTTGGGTGATAGTGGGTTTATGGTTGTACGGGATGGATGCAGCATATTTCGATCCAATCCGCAGCAACATGATTTTAATTTCACCTACCAACTAGAAAGTGGGAGTAATGGTGATTTACCTAGCTCTGTTCCTGTTGAACCTGGGGATGTCATCATTGCTGGTACGGATGGACTATTTGACAATTTGTACCCTAACGAGATCACTGCAGTTGTGGTTCATGCAATGAGGGCTGGGTTAGGCCCTCAAGTAACTGCCCAAAAGTTAGCTGCATTGGCTCGGCAGCGAGCACAGGATAAGGATCGGCAGACACCTTTCTCAACCGCTGCACAGGATGCTGGTTACCGATATTATGGGGGTAAACTCGATGATACCACAGCGGTCGTTTCATATATT | 711 | 0.4684 | KLISGSCYLPHPDKEETGGEDAHFICVDEQAIGVADGVGGWAELGINSGEYSRELMANSVNAIKEEPRGSVDPARVLEKAHLQTKAMGSSTACIITLTDQGLRAINLGDSGFMVVRDGCSIFRSNPQQHDFNFTYQLESGSNGDLPSSVPVEPGDVIIAGTDGLFDNLYPNEITAVVVHAMRAGLGPQVTAQKLAALARQRAQDKDRQTPFSTAAQDAGYRYYGGKLDDTTAVVSYI | 237 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte3g01356 | 237 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 237 | IPR039123 | - | |
| Pte3g01356 | 237 | SMART | PP2C_SIG_2 | 2 | 237 | IPR001932 | - | |
| Pte3g01356 | 237 | Pfam | Stage II sporulation protein E (SpoIIE) | 30 | 234 | IPR001932 | - | |
| Pte3g01356 | 237 | ProSiteProfiles | PPM-type phosphatase domain profile. | 3 | 237 | IPR001932 | - | |
| Pte3g01356 | 237 | SUPERFAMILY | PP2C-like | 7 | 234 | IPR036457 | - | |
| Pte3g01356 | 237 | Gene3D | - | 12 | 141 | IPR036457 | - | |
| Pte3g01356 | 237 | Gene3D | - | 146 | 237 | IPR036457 | - | |
| Pte3g01356 | 237 | SMART | PP2C_4 | 1 | 235 | IPR001932 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pte3g01356 | Pte-Chr3 | 11848403 | 11850282 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pte3g01356 | K17508 | - | tcc:18591350 | 417.157 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pte3g01356 | 3 | 11848403 | 11850282 | Pte3g01356 | 3 | 11848403 | 11850282 | RCT | |
| Pte3g01356 | 3 | 11848403 | 11850282 | Pte12g00413 | 12 | 3412509 | 3415758 | RCT |