Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00413 ATGGTGTCGGTGGCTGGGCTAGTGTTGGTGTGGAATGCAGGATTATTTGCTCGTGAGCTCATGTCTAATGCAGTAAGGGCTATCCAACAGGAGCCCAGAGGTTCCATTGATCCATTGCGGGTACTAGAGAAAGCTCATTCAAGCACAAGGGCGAAAGGTTCCTCTACAGCATGTATTATTTCCCTGACTAATAAGGGTTTAAATGCTATTAATCTAGGTGACAGCGGTTTTTTAGTGGTTAGAAATGGATCCACTATCTGCCGATCTCACCCTCAACAACATGACTTCAATCGCCCATATCGACTTCAAAGTGGCAATGGTGCTGATCTACCCCACTCTGTTGAGGTGAATCTGTGGCTTACCTTCTCACATGGATTCTAA 381 0.4567 MVSVAGLVLVWNAGLFARELMSNAVRAIQQEPRGSIDPLRVLEKAHSSTRAKGSSTACIISLTNKGLNAINLGDSGFLVVRNGSTICRSHPQQHDFNRPYRLQSGNGADLPHSVEVNLWLTFSHGF* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00413 126 SUPERFAMILY PP2C-like 11 108 IPR036457 -
Pte12g00413 126 Gene3D - 8 119 IPR036457 -
Pte12g00413 126 PANTHER PROTEIN PHOSPHATASE 2C 12 116 IPR039123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00413 Pte-Chr12 3412509 3415758 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00413 K17508 - aew:130786951 158.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00413 12 3412509 3415758 Pte12g00413 12 3412509 3415758 RCT
Pte3g01356 3 11848403 11850282 Pte12g00413 12 3412509 3415758 RCT