Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01345 ATGTTTACTAGAGTTTCTGGTCTCATCTCCACTTCCATCCGCGCTGCCTTAGACTGTCCTCTCAACTATGCTCGTAGCTATTTGGCCAATCTACTCCCTCTGTGTGTGCGAGAGGTGGTCTATCTTGATTCAGATCTTATACTAGTCGACGACATTGCAAACCTCGCGGCAACCCCACTTGGTGAAAGTTCAGTTCTTGCAGCGCCGGAGTACTGCAACGCCAATTTCACCTCTTATTTCACTCCAACATTTTGGTCCAACCCATCCTTGTCATTAACGTTTGTCAATAGGAAAACCTGCTATTTCAACACTGGGGTGATGGTGATCGATCTAGAACGATGGAGGGATGGGGACTACACAAGCAACATCGAAGAATGGATGGAGCTTCAGAAGAGAATGAGAATCTATGAACTGGGTTCACTGCCACCGTTTTTGCTTGTGTTTGCAGCTAAGATAGCTCCAGTTGATCATAGATGGAACCAACATGGTCTTGGGGGTGACAACTTCAGAGGTCTGTGCAGAGATCTTCACCCTGGTCCAGTCAGTCTCCTGCACTGGAGTGGGAAAGGTAAGCCGTGGGTTCGACTTGATGCCAACCGGCCTTGCCCTGTAGATGCTCTCTGGGCGCCTTATGATCTTTGCAGACTCCTTTTGATTTGGACTCTTGAACTTAATATAGATATAGTTGTATGTTCAGTTTGA 702 0.4701 MFTRVSGLISTSIRAALDCPLNYARSYLANLLPLCVREVVYLDSDLILVDDIANLAATPLGESSVLAAPEYCNANFTSYFTPTFWSNPSLSLTFVNRKTCYFNTGVMVIDLERWRDGDYTSNIEEWMELQKRMRIYELGSLPPFLLVFAAKIAPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPVDALWAPYDLCRLLLIWTLELNIDIVVCSV* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01345 233 SUPERFAMILY Nucleotide-diphospho-sugar transferases 16 213 IPR029044 -
Pte3g01345 233 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 3 215 - -
Pte3g01345 233 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 8 202 IPR029044 -
Pte3g01345 233 Pfam Glycosyl transferase family 8 20 195 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01345 Pte-Chr3 11657692 11659632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01345 16 215 Glycosyltransferase AT1G19300 86.500 8.00e-130 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01345 K20893 - qsa:O6P43_018853 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01345 3 11657692 11659632 Pte3g01345 3 11657692 11659632 RCT
Pte3g01345 3 11657692 11659632 Pte2g01202 2 13293199 13294750 RCT