Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01202 ATGCCAAAATCAACAATCCTACTCTTGCTGCTACTTTCCTTTTTCCTGTCCTCTCAATCATCCAATAGCGACCATGCAACCAACAATATGAACATCCGACAATCATTCAGGGAAGCCCCTCAATTCTACAACTCACCAGGTTGTCCCTCCATCGCGGATCATGATGACACAAACAACTATAACAGCATTAGCAGCAGACGAGACAATGGAGACAGTTTAATCTGCTCCAATGAAGTAGTTCATGTTGCAATGACATTAGACACCACGTACATCCGTGGCTCCATGGCAGCAATACTCTCCGTTCTGCAACACTCCTCCTGTCCCCAGAACGTCTTCTTCCACTTCGTCTCTGCCTCCAATGGGTCCCTTTCACATGCTATCATCTCCAAGACATTTCCTTATCTACAATTCAAACTCTACCACTTTGATCACTCCACAGTTTCTGGTCTCATCTCCACTTCAATCCGCTCTGCCTTAGACTGTCCTCTCAACTACGCTCGTACCTACTTGGCAAATCTACTCCCTCTGTGTGTGCGAAAAGTGGTATATCTCGATTCAGATCTTATATTAGTCGACGACATTGCAAAGCTTGCAGCCACCCCACTTGGGGAAAGCTCGGTTCTTGCAGCGCCCGAGTACTGCAACGCCAATTTCACCTCTTACTTCACTCCAACATTTTGGTCAAACCCATCTTTATCTCTCACATTTGCTAATAGGAAACCCTGCTATTTCAACACTGGGGTGATGGTGATCGATCTAGAACGATGGAGGGATGGGGACTACGTGAGAAAGATCGAAGAATGGATGGAGCTTCAGAAGAGAATGAGAATCTACGAGCTGGGTTCACTGCCACCATTTTTGCTTGTGTTTGCAGGGAACATAGCTCCAGTGGATCACAGATGGAACCAACATGGTCTGGGTGGTGACAACTTCAGAGGTCTTTGCAGGGATCTTCACCCTGGTCCAGTTAGTCTCTTGCACTGGAGTGGCAAAGGTAAGCCGTGGGCTCGACTCGACACCAACCGGCCTTGCCCTTTGGATGCTCTTTGGGCACCTTATGACCTTCTGCAAACTCCTTTTCCTCTGGATTCCTGA 1095 0.4749 MPKSTILLLLLLSFFLSSQSSNSDHATNNMNIRQSFREAPQFYNSPGCPSIADHDDTNNYNSISSRRDNGDSLICSNEVVHVAMTLDTTYIRGSMAAILSVLQHSSCPQNVFFHFVSASNGSLSHAIISKTFPYLQFKLYHFDHSTVSGLISTSIRSALDCPLNYARTYLANLLPLCVRKVVYLDSDLILVDDIAKLAATPLGESSVLAAPEYCNANFTSYFTPTFWSNPSLSLTFANRKPCYFNTGVMVIDLERWRDGDYVRKIEEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDTNRPCPLDALWAPYDLLQTPFPLDS* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01202 364 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 81 344 IPR029044 -
Pte2g01202 364 Pfam Glycosyl transferase family 8 81 337 IPR002495 GO:0016757
Pte2g01202 364 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 7 357 - -
Pte2g01202 364 FunFam Hexosyltransferase 81 344 - -
Pte2g01202 364 SUPERFAMILY Nucleotide-diphospho-sugar transferases 80 355 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01202 Pte-Chr2 13293199 13294750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01202 31 365 Glycosyltransferase AT1G19300 74.777 5.37e-175 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01202 K20893 - qsa:O6P43_016133 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01202 2 13293199 13294750 Pte2g01202 2 13293199 13294750 RCT
Pte3g01345 3 11657692 11659632 Pte2g01202 2 13293199 13294750 RCT