Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00415 ATGGCTACACTGGCTCTTGCAGTTCTTCTTTTGGCCATGACTGGTCATTCAAGTGCAAATTGGTGCATATGTAAAGATGGAGTAAGTGATCAAACGCTTCAAAAGACCATAGATTATGCTTGTGGAGCTGGAGCTGACTGCAACCCCCTCCGTCAAAACGCTCCCTGTTGGAACCCAAACACAGTCAAGGCTCACTGTAGTTATGCTGTTAACAGCTATTTCCAAAGGAAAGGCCAGGCTCAAGGTGCTTGTGACTTTTCTGGCACCGCACAGGTTTCACCATCTGACCCCAGCACTGGTGGTTGTGTGTACCCCTCAAGCTCCAGTGCCGCTGGTACTAGTACAACTCCTGTAACATCGCCAACCACTGGCACACCAACAATGGGAACTCCATCTACGGGAACACCAACAATGGGAACTCCATCTACGGGAACTCCATCTACGGGAACGCCATCAATGGGAACTCCATCTACGGGAACGCCCACAATGGGAACTCCATCTACGGGAACACCCACAATGGGAACTCCATCTACGGGAACACCCACAATGGGAACTCCATCGATGGGAACACCAACCACTACCCCATACTCAGGAACCCCGTCAACTGGAGTTCTTGGAGGAATTGGCAATGGTATTGCCCCCTCTGGAACTGGAATGAACACGGATGACAGCAGTGATGGATTTAGAGTAGTGAATGCTAGGCCACTCTCTCATCTTTCGTGCATTGTCTTCACAGGTTTGATCATGATGTTTAGGTTGGACTAA 765 0.4967 MATLALAVLLLAMTGHSSANWCICKDGVSDQTLQKTIDYACGAGADCNPLRQNAPCWNPNTVKAHCSYAVNSYFQRKGQAQGACDFSGTAQVSPSDPSTGGCVYPSSSSAAGTSTTPVTSPTTGTPTMGTPSTGTPTMGTPSTGTPSTGTPSMGTPSTGTPTMGTPSTGTPTMGTPSTGTPTMGTPSMGTPTTTPYSGTPSTGVLGGIGNGIAPSGTGMNTDDSSDGFRVVNARPLSHLSCIVFTGLIMMFRLD* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00415 254 PANTHER BETA-1,3 GLUCANASE 8 124 IPR044788 -
Pte3g00415 254 MobiDBLite consensus disorder prediction 100 177 - -
Pte3g00415 254 Pfam X8 domain 21 90 IPR012946 -
Pte3g00415 254 Gene3D - 15 116 - -
Pte3g00415 254 SMART X8_cls 20 104 IPR012946 -
Pte3g00415 254 FunFam Glucan endo-1,3-beta-glucosidase 4 15 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00415 Pte-Chr3 3422305 3425989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00415 21 104 Glycoside Hydrolase AT3G55430 40.476 3.39e-22 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00415 - - qsa:O6P43_022902 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00415 3 3422305 3425989 Pte1g02291 1 43651881 43655121 RCT
Pte3g00415 3 3422305 3425989 Pte3g00415 3 3422305 3425989 RCT