Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02291 ATGGCTCTTCTGAAAGTTTTAGTCCTTCTTCTGGCCATGGCTGGTCATTCAAGTGCCACTTGGTGCATCTGTAAAGATGGGATGGGTGACTCGGTACTCCAAAGGACCTTAGATTATGCTTGTGGAGCTGGAGCTGACTGCAACCCCATCAAACAAAACGGGCCTTGCTTCCAACCAAACACTGTCAAGGCTCACTGTAATTATGCAGTTAACAGCTATTTCCAGAGGAAGGGCCAGTCTCAAGGTTCTTGTGATTTTTCTGGCACCGCTTCGTTTTCTCCTACTGACCCCAGCACTACCGGTTGTACGTACCCCTCAAGCACAAGTGGTGGAGGCACAGGTAATACCCCTTCGACGACAATGCCAAGCACTGGAAAACCATCAATGGGAACTCCGTCTACGGGAACCACTGCAGCCAACATGCCATCAACCACAACTCCATACTCGGGAACACCTTCGACTGGAGTATTGGGAGGGATTGGCAACGGCGTAGGCCCATCTGGAGTTGGCATCAACACGGACGACAACAGCAGTGGGTTTAGAACAGTCAATACCAAGCCACTTTCTTATATTTGGTGTCTTATCTTCACAGCCCTTGTTATAACTATGCGGGCTTGA 618 0.4951 MALLKVLVLLLAMAGHSSATWCICKDGMGDSVLQRTLDYACGAGADCNPIKQNGPCFQPNTVKAHCNYAVNSYFQRKGQSQGSCDFSGTASFSPTDPSTTGCTYPSSTSGGGTGNTPSTTMPSTGKPSMGTPSTGTTAANMPSTTTPYSGTPSTGVLGGIGNGVGPSGVGINTDDNSSGFRTVNTKPLSYIWCLIFTALVITMRA* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02291 205 MobiDBLite consensus disorder prediction 90 156 - -
Pte1g02291 205 Gene3D - 15 110 - -
Pte1g02291 205 MobiDBLite consensus disorder prediction 90 161 - -
Pte1g02291 205 Pfam X8 domain 20 91 IPR012946 -
Pte1g02291 205 PANTHER BETA-1,3 GLUCANASE 8 123 IPR044788 -
Pte1g02291 205 FunFam Glucan endo-1,3-beta-glucosidase 4 15 108 - -
Pte1g02291 205 SMART X8_cls 20 104 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02291 Pte-Chr1 43651881 43655121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02291 21 116 Miscellaneous Gene Families AT2G16230 42.708 2.72e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02291 - - cave:132175235 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00415 3 3422305 3425989 Pte1g02291 1 43651881 43655121 RCT
Pte1g02291 1 43651881 43655121 Pte1g02291 1 43651881 43655121 RCT