Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00249 ATGCCCGGAATTGTTGCTGATGGAACTGAGGGGAAAGCTGAAGTGCATGAGTTGAACGGGAATGCTTCGCCTTATAAGGAGAGTTATGCCCCAATTAAGTCATCTACGAGCACATTGAGTCCACAACGTCACGAGACCAATGCTCCCAATCTTGCCATCGATGATGTGGTTGACACTTCAATTGAGAAGCTATATGAAAATGTCTGTGACATGCAGAGTTCTGATCAGTCACCGTCCAGGCGTAGCTTTGGATCTGACTGTGATGAATCCAGGATTGATTCAGAATTGTGCCATCTTGTTGGGGGAGAAATGAGGGAGGTGGAGATAATGGAAGAGGAAGTGGCAGAAAGGCAGGAAGATGATTTATGTAGTGTTTCATCTTCTAAGAAGGGAAGTTCATCTACCGGTAAAAAATCAGAGAATATTGAAGCGACTCACTCTGCAAGTCCAAGATCAATCTCTACTATACAATCAAAGAAAGCTTCCCAAACATTATTGAAATCAAGCCCCAGGACCATAAGTGCTGAGAAACCTCCAATGAACAAGCGCGTTGACAAACTGAAAAAACAAAACAGAAGGCAAAGAAATCGATCTGAAAATTCTAACAAGATAACGTTGGATAATGCTGATCTGGGACCATTTTTACTTAAGCAAGCTAGAGATTTGATATCTTCTGGAGATAATCTTCAGAAAGCTCTTGAATTAGCTCTTCGAGCGGCAAATTCATTTGAGGTGTGTGCTGCTGGGGAACTAAGTTTAGAACTGGTTATGTGTCTACATGTTACCGCTGCAATTTATTGCAGTCTGGGTCAGTATGATGAGGCAATTCCTGTCCTTGAGCGTTCAATTGAGATTCCTACTGTTGAGGAAGGTCAAGAGCATGCCCTTGCCAAATTTGCTGGTTACATGCAGTTAGGGGACACTTATGCCATGCTGGGCCAGCTTGAAAACTCAACCATTTATTACAAAACTGGACTCGAACTTCAGAAGCAGGTTCTTGGTGAAAAAGACCCAAGAGTAGGTGAAACTTGTCGGTATGTGGTTGAAGCTCATGTTCAGGCATTGCAATTTGACGAAGCTCAGAGAATCTGTCAAATGTCTCTCGACATTCACAAAGAAAACAGTTCACCTGCATCTCTTGAAGAAGCAGCTGACCGGAGGCTTATGGGCCTCATATGTGAAACAAAAGGAGATCATGAAGCAGCTCTTGAACATCTTGTTTTAGCCAGCATGACAATGGTAGCAAATGGACAAGAAGTTGAGGTGGCATCCATTGACTGCAGCATCGGAGACACATATGCATCTTTGACTCGATATGATGAGGCTGTTTTTGCTTATCAGAAGGCACTTACAGTTTTTAAGACTAGCAAAGGAGAAAATCATCCCACTGTGGCTTCTGTTTTTGTACGTTTGGCTGATTTGTACAAGAGAACTGGTAAACTAAGAGAAGCAAAATCTTACTGTGAGAATGCACTTCGGATTTATGAGAAGCCTGTGCAGGGGATCCCACCTGAGGAGATTGCAAGTGGTTTAGCTGATGTTTCCGCCGTATATGAATCAATGAATGAACTTGATCAGGCGCTCAAGCTGTTGGAGAAGGCATTGCAGATGTATAATGATGCTCCTGGTCAGCAAAGTGCAGTTGCTGGAGTTGAAGCTCAGATGGGAGTTATTTATTACATGCTGGGGAATTATGGTGAGTCTTACAACTCCCTGAAGAATGCAATCAATAAGTTTCGTGCCAGCGGGGAGAAGAAATCAGCCTTCTTTGGTATTGCTCTTAATCAGATGGGACTAGCCTGTGTGCAGCGTTATTCAATCAATGAAGCTGTTCAATCATTTGAAGAAGCCCGGCTTGTATTGGAACACGAATATGGACCATACCACCCTGACACTCTAGGAGTATACAGCAATCTTGCTGGTACTTATGATGCCATTGGCAGGCTGGATGATGCAATCGAACTGTTGGAGTATGTAGTTGGGATGAGGGAAGAAAAGCTTGGGACAGCAAATCCAGATGTGAATGATGAGAAGAGAAGGTTGGCTGAGTTATTGAAAGAAGCAGGCAGAGGTAGGAGCAGAAAAGGTAGATCACTTGAGAACCTCCTTGAAGCCCATACTCGTAGTATAAGCAACAGTGAGATCAGGCATGATTATGTGATAGTAAATACGACATAG 2178 0.432 MPGIVADGTEGKAEVHELNGNASPYKESYAPIKSSTSTLSPQRHETNAPNLAIDDVVDTSIEKLYENVCDMQSSDQSPSRRSFGSDCDESRIDSELCHLVGGEMREVEIMEEEVAERQEDDLCSVSSSKKGSSSTGKKSENIEATHSASPRSISTIQSKKASQTLLKSSPRTISAEKPPMNKRVDKLKKQNRRQRNRSENSNKITLDNADLGPFLLKQARDLISSGDNLQKALELALRAANSFEVCAAGELSLELVMCLHVTAAIYCSLGQYDEAIPVLERSIEIPTVEEGQEHALAKFAGYMQLGDTYAMLGQLENSTIYYKTGLELQKQVLGEKDPRVGETCRYVVEAHVQALQFDEAQRICQMSLDIHKENSSPASLEEAADRRLMGLICETKGDHEAALEHLVLASMTMVANGQEVEVASIDCSIGDTYASLTRYDEAVFAYQKALTVFKTSKGENHPTVASVFVRLADLYKRTGKLREAKSYCENALRIYEKPVQGIPPEEIASGLADVSAVYESMNELDQALKLLEKALQMYNDAPGQQSAVAGVEAQMGVIYYMLGNYGESYNSLKNAINKFRASGEKKSAFFGIALNQMGLACVQRYSINEAVQSFEEARLVLEHEYGPYHPDTLGVYSNLAGTYDAIGRLDDAIELLEYVVGMREEKLGTANPDVNDEKRRLAELLKEAGRGRSRKGRSLENLLEAHTRSISNSEIRHDYVIVNTT* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00249 725 Pfam Tetratricopeptide repeat 302 331 IPR019734 GO:0005515
Pte3g00249 725 Gene3D Tetratricopeptide repeat domain 603 709 IPR011990 GO:0005515
Pte3g00249 725 Pfam Tetratricopeptide repeat 263 285 IPR019734 GO:0005515
Pte3g00249 725 ProSiteProfiles TPR repeat profile. 508 541 IPR019734 GO:0005515
Pte3g00249 725 Gene3D Tetratricopeptide repeat domain 409 591 IPR011990 GO:0005515
Pte3g00249 725 MobiDBLite consensus disorder prediction 113 205 - -
Pte3g00249 725 Gene3D Tetratricopeptide repeat domain 301 408 IPR011990 GO:0005515
Pte3g00249 725 MobiDBLite consensus disorder prediction 125 175 - -
Pte3g00249 725 ProSiteProfiles TPR repeat profile. 423 456 IPR019734 GO:0005515
Pte3g00249 725 Pfam Tetratricopeptide repeat 512 541 - -
Pte3g00249 725 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 44 706 - -
Pte3g00249 725 SMART tpr_5 299 332 IPR019734 GO:0005515
Pte3g00249 725 SMART tpr_5 549 582 IPR019734 GO:0005515
Pte3g00249 725 SMART tpr_5 508 541 IPR019734 GO:0005515
Pte3g00249 725 SMART tpr_5 423 456 IPR019734 GO:0005515
Pte3g00249 725 SMART tpr_5 633 666 IPR019734 GO:0005515
Pte3g00249 725 SMART tpr_5 256 289 IPR019734 GO:0005515
Pte3g00249 725 SMART tpr_5 591 624 IPR019734 GO:0005515
Pte3g00249 725 SMART tpr_5 465 498 IPR019734 GO:0005515
Pte3g00249 725 Gene3D Tetratricopeptide repeat domain 87 300 IPR011990 GO:0005515
Pte3g00249 725 Coils Coil 521 541 - -
Pte3g00249 725 Coils Coil 184 204 - -
Pte3g00249 725 MobiDBLite consensus disorder prediction 1 48 - -
Pte3g00249 725 MobiDBLite consensus disorder prediction 28 47 - -
Pte3g00249 725 Pfam Tetratricopeptide repeat 592 659 - -
Pte3g00249 725 Pfam Tetratricopeptide repeat 422 497 - -
Pte3g00249 725 SUPERFAMILY TPR-like 248 669 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00249 Pte-Chr3 2131176 2134925 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00249 - - zju:107418410 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00249 3 2131176 2134925 Pte2g02383 2 43354054 43356333 RCT
Pte3g00249 3 2131176 2134925 Pte3g00249 3 2131176 2134925 RCT