Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02383 ATGCCTGGAATTGTTGGTGATGGAATAAATGGGGAAGCTGAGGTGCATGAGTTGAATGGGCATGCTTCACCTTATAAGGAGAGTTCTGTTTTCATTACGTCACCTATGTGTACACTGAGTCCACGAGGTCTCGAGGCCACTGCTCCTAAACTTCCCATCGATGATGTGGTTGACACTTCAATTGAGAAGCTGTATGAGAATGTCTGTGAAATGCAGAGTTCTGATCAGTCACCCTCAAGGCGTAGCTTTGGATCTGATGGTGATGAATCCAGGATTGATTCAGAGTTGCGCCATCTTGTTGGGGGAGAAATGAGGGAGGTGGAGATAATGGAAGAGGAAGTGGCAGAAAATCAGGAAGATAATTTAGATAGTGTTTCATCTTCTAAGAAGGGAAGTTTATCTACAGGTAAAATATCAGGAAATGCTGAAGATAATCAATCTGCAAGTCCAAGATCAATCTCTACTGGAAAATCAAAGAAAGACTCCCAAAAATCATTGAAATCAAGTCCCACGACCATAAGTGCTGAGAAACCTCCAATGAACAAGCGCATTGACAAACTGAAAAAACAAAACAAAAGGCAAAGAAATCGAGCTGAAAATTCTGGCTGGACAAAATCGGATAATCCTGATCTAGGACCATTTTTACTTAAGCAAGCCAGAGATTTGATGTCTTCTGGAGATAATCTTCAGAAAGCTCTTGAATTAGCTATTCGAGCAGCAAAATCATTTGAGATAGGTACTAATGGGAAACCAAGTTTAGAACTGGCCATGTGTCTACATGTTACGGCTGCAATTTATTGCAGTTTGGGTCAGTATTATGAGGCCATTCCTGTCCTTAAGCGTTCAATTGAGATTCCTATTGTTGAGGAAGGCCAAGAGCATGCCCTTGCCAAATTTGCAGGTCACATGCAGTTAGGGGACACATATGCCATGCTTGGGCAGCTAGAAAATTCAACCATTTGTTTCAGAACTGGATTGGAACTTCAGAAGCAGGTTCTTGGTGAAAAAGACCCAAGAGTTGGTGAAACTTGTAGGTATGTGGCTGAAGCTCATGTTCAGGCATTGCAATTTGAGGAAGCTCAGAGAATCTGTCAAATTGCTCTCGACATTCACAAAGAAAGCAGTTCACCCGCATCTCTTGAAGAAGCAGCTGACAGGAGGCTTATGGGCCTCATTTGTGAAACAAAAGGTGATCATGAAGCAGCTCTTGAGCATCTTGTTTTATCCAGCATGGCAATGGTAGCAAATGGCCAGGAAGTTGAGGTGGCATCCATTGACTGCAGCATTGGAGACACATATTTATCTTTGACTCGATACGATGAGTCTGTTTTTGCTTATCAGAAGGCACTTACAGTTTTTAAGACTAGCAAAGGAGAAAATCATCCTGCTGTGGCTTCAGTCTTTGTACGTTTGGCAGATTTGTACAACAGGACTGGTAAATTAAGGAAAGCAAAATCTTATTGTGAGAATGCACTCCGGATTTACGAGAAGCCTGTGCAGGGGATCCCATCTGAGGAGATTGCAAGTGGTTTAACCGATGTTTCCGCCATATATGAATCAATGAATGAGCTTGATCAGGCACTCAAGCTGCTGGAGAAGGCATTGCTGATGTATAATGACGCTCCTGGTCAGCAGAGTGCAGTTGCTGGAATTGAAGCTCAGATGGGAGTTATCTATTACATGCTGGGGAATTATAGTGAGTCTTACAATTCCCTGAAGAATGCAATCGGTAAGCTTGGTGGTGCTAGTGGGGAGAAAAAATCAGCCTTCTTTGGTATTGCTCTTAATCAGTTGGGACTAGCCTGTGTACAGCGTTGTTCACTCAATGAAGCAGTTCAATTATTTGAAGAAGCCAGGATTGTATTGGAGCATGAATATGGACCATACCATCCTGACACTCTGGGAGTATACAGCAATCTTGCTGGTACTTATGATGCCATTGGCAGGTAG 1950 0.4272 MPGIVGDGINGEAEVHELNGHASPYKESSVFITSPMCTLSPRGLEATAPKLPIDDVVDTSIEKLYENVCEMQSSDQSPSRRSFGSDGDESRIDSELRHLVGGEMREVEIMEEEVAENQEDNLDSVSSSKKGSLSTGKISGNAEDNQSASPRSISTGKSKKDSQKSLKSSPTTISAEKPPMNKRIDKLKKQNKRQRNRAENSGWTKSDNPDLGPFLLKQARDLMSSGDNLQKALELAIRAAKSFEIGTNGKPSLELAMCLHVTAAIYCSLGQYYEAIPVLKRSIEIPIVEEGQEHALAKFAGHMQLGDTYAMLGQLENSTICFRTGLELQKQVLGEKDPRVGETCRYVAEAHVQALQFEEAQRICQIALDIHKESSSPASLEEAADRRLMGLICETKGDHEAALEHLVLSSMAMVANGQEVEVASIDCSIGDTYLSLTRYDESVFAYQKALTVFKTSKGENHPAVASVFVRLADLYNRTGKLRKAKSYCENALRIYEKPVQGIPSEEIASGLTDVSAIYESMNELDQALKLLEKALLMYNDAPGQQSAVAGIEAQMGVIYYMLGNYSESYNSLKNAIGKLGGASGEKKSAFFGIALNQLGLACVQRCSLNEAVQLFEEARIVLEHEYGPYHPDTLGVYSNLAGTYDAIGR* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02383 649 Gene3D Tetratricopeptide repeat domain 302 407 IPR011990 GO:0005515
Pte2g02383 649 Pfam Tetratricopeptide repeat 422 497 - -
Pte2g02383 649 Gene3D Tetratricopeptide repeat domain 408 586 IPR011990 GO:0005515
Pte2g02383 649 Gene3D Tetratricopeptide repeat domain 119 301 IPR011990 GO:0005515
Pte2g02383 649 MobiDBLite consensus disorder prediction 69 210 - -
Pte2g02383 649 MobiDBLite consensus disorder prediction 82 108 - -
Pte2g02383 649 Coils Coil 521 541 - -
Pte2g02383 649 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 48 649 - -
Pte2g02383 649 MobiDBLite consensus disorder prediction 120 156 - -
Pte2g02383 649 SUPERFAMILY TPR-like 420 540 IPR011990 GO:0005515
Pte2g02383 649 SUPERFAMILY TPR-like 253 404 IPR011990 GO:0005515
Pte2g02383 649 Gene3D Tetratricopeptide repeat domain 591 649 IPR011990 GO:0005515
Pte2g02383 649 SMART tpr_5 465 498 IPR019734 GO:0005515
Pte2g02383 649 SMART tpr_5 592 625 IPR019734 GO:0005515
Pte2g02383 649 SMART tpr_5 341 374 IPR019734 GO:0005515
Pte2g02383 649 SMART tpr_5 423 456 IPR019734 GO:0005515
Pte2g02383 649 SMART tpr_5 299 332 IPR019734 GO:0005515
Pte2g02383 649 SMART tpr_5 508 541 IPR019734 GO:0005515
Pte2g02383 649 SMART tpr_5 549 582 IPR019734 GO:0005515
Pte2g02383 649 SMART tpr_5 256 289 IPR019734 GO:0005515
Pte2g02383 649 SUPERFAMILY TPR-like 548 649 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02383 Pte-Chr2 43354054 43356333 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02383 - - zju:107418410 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00249 3 2131176 2134925 Pte2g02383 2 43354054 43356333 RCT
Pte2g02383 2 43354054 43356333 Pte2g02383 2 43354054 43356333 RCT