LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte3g00151	ATGGGGGAAGGCGTGGAAGAGAAGAAATCAGGGGAAAAGAAGATGGAGGAGAAGAAACTTGGAGAGAAAGAGAAGGCGAACGAGCCTGAGAAAGCAGCTGAACAGGAAAAGGAAGAGAAGAAATATGAGGAAACCAAGGAAGCGAAGGAGTCCAAAGAAGAAGATTCTGCAACACCACCACCACCACCACCTCAAGAAATTGTGCTCAAAGTCTACATGCATTGTGAAGGTTGTGCGCGTAAAGTTCGCAGCTCACTCAAGGGATTCGAAGGGGTTGAAGATGTTATCACAGATTGCAAGACACAGAAGGTGATTGTGAAGGGAGAGAAGGCCGATCCACTGAAGGTTCTGGAAAGAGTACAGAGGAAGAGCCACAGAAGAGTTGAGCTTCTCTCTCCCATCCCAAAACCACCGGCGGAGGAGGAGAAGAAGACCGAAGAGGCACCCAAGCCAGAGGAAAAGAAAGAAGAGGCTCCGGTTATTCTTGTGGTTATAAAAGTCCATATGCACTGTGAAGCTTGTGCACATGAATTAAAGAAACGTATCATGAGAATCAAAGGAGTCGAATCAGCAGAGCCTGATCTGAAGAACTCGGAGGTGAGTGTGAAGGGTCTGTTTGAACCTTCCAATCTAGTGAAATATCTGTACAAGCGAACTGGTAAGCATGCAGTGATTGTCAAGCAAGAGACAGAGAAAATAGATAAAGCGGAAGAAAGCATAGAGTCCAAAGAGGATAAGAAAGTTGAAGACGTTGATGATGAAGACAAAAAGGATGGGAGTAGCGGCAACGTCCGTTGCGTCGCGGAAGAGAAAGGCGACAAGAAAGAAGCTGACAGGAAAGAAGCTGACGGCGAAGTCAAACCAGATTCTACTGCTAATACAGTCGAGACCAAAGTAAAGGAGTCGAAGAAGAACGAATTTCTGTGTCACTATCCTGATTATTCAGTAAGATTCGTGGATGCTACTTACAATCTGTACCCACAACCACCACCACCACCACTACCGTTAAGGTACTTGTATCCTGGGTATGATCCACCCATGCCACACCCACCCCAGATGTTCAGTGATGAGAATCCAAATGCATGCTCAGTCATGTAA	1098	0.4608	MGEGVEEKKSGEKKMEEKKLGEKEKANEPEKAAEQEKEEKKYEETKEAKESKEEDSATPPPPPPQEIVLKVYMHCEGCARKVRSSLKGFEGVEDVITDCKTQKVIVKGEKADPLKVLERVQRKSHRRVELLSPIPKPPAEEEKKTEEAPKPEEKKEEAPVILVVIKVHMHCEACAHELKKRIMRIKGVESAEPDLKNSEVSVKGLFEPSNLVKYLYKRTGKHAVIVKQETEKIDKAEESIESKEDKKVEDVDDEDKKDGSSGNVRCVAEEKGDKKEADRKEADGEVKPDSTANTVETKVKESKKNEFLCHYPDYSVRFVDATYNLYPQPPPPPLPLRYLYPGYDPPMPHPPQMFSDENPNACSVM*	366

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte3g00151	365	Gene3D	-	63	136	-	-
	Pte3g00151	365	Pfam	Heavy-metal-associated domain	165	212	IPR006121	GO:0046872
	Pte3g00151	365	Pfam	Heavy-metal-associated domain	70	122	IPR006121	GO:0046872
	Pte3g00151	365	ProSiteProfiles	Heavy-metal-associated domain profile.	160	224	IPR006121	GO:0046872
	Pte3g00151	365	Coils	Coil	226	246	-	-
	Pte3g00151	365	Gene3D	-	160	226	-	-
	Pte3g00151	365	SUPERFAMILY	HMA, heavy metal-associated domain	162	225	IPR036163	GO:0046872
	Pte3g00151	365	MobiDBLite	consensus disorder prediction	126	155	-	-
	Pte3g00151	365	MobiDBLite	consensus disorder prediction	1	56	-	-
	Pte3g00151	365	PANTHER	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7	48	365	IPR044577	GO:0046872
	Pte3g00151	365	MobiDBLite	consensus disorder prediction	236	299	-	-
	Pte3g00151	365	MobiDBLite	consensus disorder prediction	1	68	-	-
	Pte3g00151	365	ProSiteProfiles	Heavy-metal-associated domain profile.	64	128	IPR006121	GO:0046872
	Pte3g00151	365	MobiDBLite	consensus disorder prediction	236	287	-	-
	Pte3g00151	365	CDD	HMA	73	129	IPR006121	GO:0046872
	Pte3g00151	365	Coils	Coil	32	55	-	-
	Pte3g00151	365	SUPERFAMILY	HMA, heavy metal-associated domain	64	123	IPR036163	GO:0046872
	Pte3g00151	365	CDD	HMA	164	223	IPR006121	GO:0046872

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte3g00151	Pte-Chr3	1498188	1500360	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte3g00151	-		-	cpap:110823024	320.472

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pte3g00151	3	1498188	1500360	Pte1g02017	1	41311248	41313467	RCT
	Pte3g00151	3	1498188	1500360	Pte3g00151	3	1498188	1500360	RCT