Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00032 ATGCCATCAGGCTATCAAATCCTCAATGATCGACCCATTGATCAGTGGAAGGTTACAGAGTTGAAAGAGGAGCTCAAGAGAAGGAAACTCAAAACTGTAGGTTTGAAGGAGGATTTGGTGAAGCGATTGGATGAAGCAGTTCGTATTGAAAGAGAGGCTGATGAAAAGACTACTGTTGTTGTTCCTGATTCTGATTCCCAACCTACTGCAACTGTTGGAGAGACTGTTCCTGTAAATGCTGAAACCAATGTTGGGACTAGTGGCGATATTACCAAAACATCTGCACAGGAAAGCTCTGAAATAACTAAAAATAAAAATGCTGCAACTTCTAATCCGGACAACATTGAAATGAATGAGATGGAAAATGATGGTTCACAAGGCAGTAACAAGCATGAGCTGGTGAATGTTGTAAAGGTCAACGTTGATATCAATGCTAGTGAACCACTTGTGGAGCAAGAGAAAGTTCAGCATGATGGCCTGCAAGGTGCTGAAACATCAACAGTGGCAGAAGTGCTAGCTGGTCTTGAGACTGGTGCTGATGCTGGCAACGACATTGTGGCATGCGAGACTCATGTTCGTGAAACCTTAGTTACTCATCAAGGTTCACAGGATGGTAAAAATGAGGAGAGGACTGAGATTGGTGAAACTCAGCTTGGCATTGAAAACTCAGATCTTCCTCATAAGAATGTAGACCTTATGCCTCACGTGGGAAATGAGGATTCAGAACCCCTGCTGCTGGTAAGTGAGGATTCAAAGCCCCATGCAATGAGCGATGGCTCAATGCTGCACGTGGAGTTCGATTCAAAGCATTCAGATGAGGATGTATTACGTGACCCTTCTGTTCCTGAAAGCCAGGTATCTGAGGTCAACCTAATTTTAGGGTCTCAAGTAAAATCTGATTCTGTTTCTAATGATTCTCTCTCAATTAATGCAAAGATTGAACTCAAGGATAATATAAATACTGATAATGTCAAATTAGAACAAGATAATATTAGACTCACGATGGTGGAACCATCACCCAGTAATGTTGTGCCTGTTGCTGATGAATCATATTCAATGAATGTTGAAGAACCACATGAGAAAAAGGAATCTGTTGGAGAGAAAAATGACCATGACAATAACGCTGCGAGTCCAGACTTGAAAAAGACAAATAGTAGTGAAGATATGGTTTATCCAGAGAAGTTAAATTTGGATAGGAGTTCCGGTGAGGATTCTATGGATGAGGATTTACCTGAAAATAAACAGCTTGACTCGAAATATAATTTAGATGAACATAAGGAGAAGAGTGAGAAAAGTGAAATCCCCTTTACAAAGGAGAAATGTAGTGCTGTTATTTTGCCAGAGGGACATTCTGCTAAGAAGAATGATGTCCATCTTGACGACGACAGTCATCCCTCTGCCTCTTCTGAGAAAAGAAAACTACCTGCTCAAGCAGCGATTGGGAACAATGAGCCTTCAAAGAGGCAAAGGAGGTGGAATGATGAAAGAGTCACACTCGCAAGTTCTCAAAATACCAATTTCATTTCTGATGCTAGCGCTTCTGTAACTACGCCAAAGGAAATACCAACTTATGGAACTCGTAGCTTCACTAGATCCGATTCTTCAGCTAATGATGAGAAGCAGCGAATTGTACCACTTCCTGAAAAAACTCCAACCAATTCCCTCAAAATTGATCGATTTCTCCGTCCTTTTACTGTGAAAGCTGTGCAAGAGCTTCTAGGCAAAACTGGGACGGTCACAGAGTTTTGGATGGATCACATCAAGACTCATTGTTATGTTACTTTTTCGTCAGTAGAAGAAGCTATTGAGACTAGGAATGCTGTGTACAATCTGCAATGGCCTCCAAACGGTGGGCGTCTCCTAGTAGCAGAGTTTGTTGATCCTCAAGAAGTTAAAATGAAAGTAGAACCCTCTTCGCAGGCTGCACCTGCCAGTGTTGATAATTCAGTTGCTCCCACTCCGTCTGCACCTAAATCTGAACCTTCTCGTCAGCCGAGGCAGCACCATCAGCTGCAGCTTCCACCACCACCTCCTTCCCTTGATGACCCTACGTCGACAAGAGAGCTACTTCCATCACGACAACCAGTCCCAGAGAAAGCTGAACCTGTAACTCTGGATGATCTCTTCCGCAAAACCAAAGCAACTCCAAGGATCTACTATTTGCCCCTTTCAGAAGAACAAGTTGCGGTAAAACTTGCAGTACAGTGCAAAAACACCAAGCACTAG 2226 0.4268 MPSGYQILNDRPIDQWKVTELKEELKRRKLKTVGLKEDLVKRLDEAVRIEREADEKTTVVVPDSDSQPTATVGETVPVNAETNVGTSGDITKTSAQESSEITKNKNAATSNPDNIEMNEMENDGSQGSNKHELVNVVKVNVDINASEPLVEQEKVQHDGLQGAETSTVAEVLAGLETGADAGNDIVACETHVRETLVTHQGSQDGKNEERTEIGETQLGIENSDLPHKNVDLMPHVGNEDSEPLLLVSEDSKPHAMSDGSMLHVEFDSKHSDEDVLRDPSVPESQVSEVNLILGSQVKSDSVSNDSLSINAKIELKDNINTDNVKLEQDNIRLTMVEPSPSNVVPVADESYSMNVEEPHEKKESVGEKNDHDNNAASPDLKKTNSSEDMVYPEKLNLDRSSGEDSMDEDLPENKQLDSKYNLDEHKEKSEKSEIPFTKEKCSAVILPEGHSAKKNDVHLDDDSHPSASSEKRKLPAQAAIGNNEPSKRQRRWNDERVTLASSQNTNFISDASASVTTPKEIPTYGTRSFTRSDSSANDEKQRIVPLPEKTPTNSLKIDRFLRPFTVKAVQELLGKTGTVTEFWMDHIKTHCYVTFSSVEEAIETRNAVYNLQWPPNGGRLLVAEFVDPQEVKMKVEPSSQAAPASVDNSVAPTPSAPKSEPSRQPRQHHQLQLPPPPPSLDDPTSTRELLPSRQPVPEKAEPVTLDDLFRKTKATPRIYYLPLSEEQVAVKLAVQCKNTKH* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00032 741 MobiDBLite consensus disorder prediction 60 115 - -
Pte3g00032 741 MobiDBLite consensus disorder prediction 452 491 - -
Pte3g00032 741 MobiDBLite consensus disorder prediction 54 115 - -
Pte3g00032 741 MobiDBLite consensus disorder prediction 452 469 - -
Pte3g00032 741 MobiDBLite consensus disorder prediction 353 434 - -
Pte3g00032 741 ProSiteProfiles SAP motif profile. 13 47 IPR003034 -
Pte3g00032 741 CDD RRM_ACINU 552 636 IPR034257 -
Pte3g00032 741 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 1 740 - -
Pte3g00032 741 MobiDBLite consensus disorder prediction 353 377 - -
Pte3g00032 741 Pfam RNSP1-SAP18 binding (RSB) motif 702 738 IPR032552 -
Pte3g00032 741 MobiDBLite consensus disorder prediction 634 704 - -
Pte3g00032 741 SMART sap_9 13 47 IPR003034 -
Pte3g00032 741 MobiDBLite consensus disorder prediction 518 532 - -
Pte3g00032 741 Gene3D SAP domain 3 59 IPR036361 -
Pte3g00032 741 MobiDBLite consensus disorder prediction 641 669 - -
Pte3g00032 741 SUPERFAMILY SAP domain 13 49 IPR036361 -
Pte3g00032 741 Pfam SAP domain 14 46 IPR003034 -
Pte3g00032 741 MobiDBLite consensus disorder prediction 518 540 - -
Pte3g00032 741 SUPERFAMILY RNA-binding domain, RBD 547 638 IPR035979 GO:0003676
Pte3g00032 741 MobiDBLite consensus disorder prediction 386 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00032 Pte-Chr3 519221 523787 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00032 K12875 - qsa:O6P43_023249 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00032 3 519221 523787 Pte3g00032 3 519221 523787 RCT
Pte3g00032 3 519221 523787 Pte2g02643 2 45446959 45450188 RCT