LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte2g02643	ATGCCATCAGGCTATGAAATCCTCAATGATAGACCCATTGACCAGTGGAAGGTTACAGAGTTGAAGGAGGAGCTCAAGAGAAGGAAACTTAAAATTGTAGGTTTGAAGGAGGATTTGGTGAAGCGCTTGGATGAAGCAGTTCGTTTTGAAAGAGAGGCTGCTGAAAAGACTACTGTTGTTCATGATTCTGACCCCCAACCTACTACATCTGTTGGAGAGGCCGTTCCCATAAAAGCTGGAACTTGTGGTGATTTTAGTAAAACATCTGGACAGGAAAATTCTGAGACAATTGAAACAACCAAAACTAAAAATGGTGGGACTTCTGATCAGGACAACATTGAAATGGACGAGAAGCAAAATTCTGGAAAACAAAATGATGACTCCCAAGGTGGCAACAATCATGAGCTGGTAGGTTTTGTTAAGGTCAATGTTGATATCAATGCTAGTGAACCATTTGTGGAGCAAGAGAAAGGGAAGCAGAATGGCTTGCAAGTTACTGAAAATCCTACAACGGTGGGAGAAGTAATTACAGTCCTTGGGAGTGGTACTGCTGCAGGAAACAATATTGTGGCATCTGATGCTGATGTTGCTGAAACGTTGGTCACTCATCAGGGGTCACAGGAGACAGAAGAGACAAGTGAGATTGGTGGAATTAAGCTGGGAAATGTTACCTCAAAACTCTCCCAGAAAAATGTAGATTCAGTGCCTCAGCTGGAGAATGATGCTACAGAACCCCAGCTGGTAAGTGAGGATTTAAAGCTCCTACCAACGAGTGGTGGCTCAAGGCTGCAGGTGGAGTTTGATTCAAAGCATTCAGACGAGGATTTATTGCGAGACCCTTCTGCTCCTGAATGCCAGGTATCTGAGGTCAGCCCAATTTTAGGGTCTCAAGTAAAATCTGATTCTATTTCTACTGATTCTCTCTCAATTAATGAAAAGACTGAACTAAAGGATAATATAATTACTGATAATGTCAATTTAGAACAAGATAATATTAGAGTCGCTATGGTGGAACCATCACCCTGTAATGTTGTTCCTGTTGCTGATGAATCATCTTCAATGAATGTCGAAGAACCACTTGAGAAAAAGGCATCTGTTGGAGAGAAAAATGACCATGACAATAATGCTGCGAGTCCAGAGTTGAAAAAGACAAATAGTAGTGAAGATATGGTTTATCCTGAGAAGTTAAATTTGGATAGGAGTCCTGGTGAGGATTCTATGGATGAGGATATACCGGAAAGTAAACAGCTTGATTCAAAATATAACTTAGATGAACACAAGGAGAAGATTGAGAAAAGTGAAGTGCCTATTACAAAGGAGAAATGCTGTGCTGTTAGTTCACTAGAGGCACTTTCTGCTAGGAAGAATGATGTCCATGTTGACAACGCTGAGAAAAGAAAACTACCTGATCAAGCAGTGGTTGGGAATAATGAGCCTTTAAAGAGGCAACGGAGGTGGAATGATGAAAGAGTGGAAGTCACAAATTCTAAAAAAACCAATTTTACTTCCAAAGCTAGTGCTACTGTAACTACACCCAAGGAAATACCAACTTCTGGAACGCACAGCTTCACTAGATCTGATTCTACAGTTAATGATGAGGCACCCAAGGAACGAAGTGTACCACCATCTGAAAAAACTCCAACCAATTCCCTTAAAATCGATCGATTTCTCCGTCCTTTTACCATGAAAGCTGTGCAAGAGCTTCTAGGCAAAACTGGGACAGTCACAGAGTTTTGGATGGATCACATCAAGACACATTGTTATGTTACTGTGGAGCCCTCTTCACAGGCTGCACCTACCAGTGTTGGTATTCCAGTTCCTCCTGCTCCTATTGCAACTGAACCTTCACCTTCACCTCGTCTGCCCAGGCAGTACCATCAGCCGCAGCTTCCACTGCCCCCACCTTTAAATAGCGAACCTTCTCCATTAGCAGGGGAGCGGCTTCCATCACAACAACCAGTAGCTGAGAAAGCTGAACCTGTAACTCTGGATGATCTCTTCCGCAAAACCAAAGCAACTCCAAGAATCTATTATTTGCCCCTTTCTGATGAACAAGTTGCTGCAAAACTTGCAGCACAGGGCAAAATCACCGAGGACTAG	2100	0.4257	MPSGYEILNDRPIDQWKVTELKEELKRRKLKIVGLKEDLVKRLDEAVRFEREAAEKTTVVHDSDPQPTTSVGEAVPIKAGTCGDFSKTSGQENSETIETTKTKNGGTSDQDNIEMDEKQNSGKQNDDSQGGNNHELVGFVKVNVDINASEPFVEQEKGKQNGLQVTENPTTVGEVITVLGSGTAAGNNIVASDADVAETLVTHQGSQETEETSEIGGIKLGNVTSKLSQKNVDSVPQLENDATEPQLVSEDLKLLPTSGGSRLQVEFDSKHSDEDLLRDPSAPECQVSEVSPILGSQVKSDSISTDSLSINEKTELKDNIITDNVNLEQDNIRVAMVEPSPCNVVPVADESSSMNVEEPLEKKASVGEKNDHDNNAASPELKKTNSSEDMVYPEKLNLDRSPGEDSMDEDIPESKQLDSKYNLDEHKEKIEKSEVPITKEKCCAVSSLEALSARKNDVHVDNAEKRKLPDQAVVGNNEPLKRQRRWNDERVEVTNSKKTNFTSKASATVTTPKEIPTSGTHSFTRSDSTVNDEAPKERSVPPSEKTPTNSLKIDRFLRPFTMKAVQELLGKTGTVTEFWMDHIKTHCYVTVEPSSQAAPTSVGIPVPPAPIATEPSPSPRLPRQYHQPQLPLPPPLNSEPSPLAGERLPSQQPVAEKAEPVTLDDLFRKTKATPRIYYLPLSDEQVAAKLAAQGKITED*	700

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte2g02643	699	PANTHER	SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN	593	696	-	-
	Pte2g02643	699	MobiDBLite	consensus disorder prediction	387	423	-	-
	Pte2g02643	699	Gene3D	SAP domain	4	59	IPR036361	-
	Pte2g02643	699	Pfam	SAP domain	14	46	IPR003034	-
	Pte2g02643	699	MobiDBLite	consensus disorder prediction	349	423	-	-
	Pte2g02643	699	MobiDBLite	consensus disorder prediction	597	661	-	-
	Pte2g02643	699	CDD	RRM_ACINU	548	600	IPR034257	-
	Pte2g02643	699	MobiDBLite	consensus disorder prediction	84	109	-	-
	Pte2g02643	699	MobiDBLite	consensus disorder prediction	355	378	-	-
	Pte2g02643	699	SMART	sap_9	13	47	IPR003034	-
	Pte2g02643	699	MobiDBLite	consensus disorder prediction	51	134	-	-
	Pte2g02643	699	Pfam	RNSP1-SAP18 binding (RSB) motif	656	694	IPR032552	-
	Pte2g02643	699	SUPERFAMILY	SAP domain	13	49	IPR036361	-
	Pte2g02643	699	MobiDBLite	consensus disorder prediction	499	529	-	-
	Pte2g02643	699	ProSiteProfiles	SAP motif profile.	13	47	IPR003034	-
	Pte2g02643	699	MobiDBLite	consensus disorder prediction	499	551	-	-
	Pte2g02643	699	MobiDBLite	consensus disorder prediction	603	640	-	-
	Pte2g02643	699	Coils	Coil	18	38	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte2g02643	Pte-Chr2	45446959	45450188	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte2g02643	K12875		-	qsa:O6P43_030432	543.502

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pte2g02643	2	45446959	45450188	Pte2g02643	2	45446959	45450188	RCT
	Pte3g00032	3	519221	523787	Pte2g02643	2	45446959	45450188	RCT