Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01926 ATGGGGTCATACAGAGCAGATGATGATTATGATTACCTGTTTAAAGTTGTGTTGATTGGTGACTCTGGTGTTGGAAAATCCAACCTTTTGTCGAGGTTCTCCAGGAATGAGTTTAGCCTTGAATCCAAGTCCACCATTGGGGTTGAGTTTGCTACCAGAAGCATTCATGTTGATGATAAGATCGTCAAGGCTCAGATTTGGGATACCGCTGGCCAAGAAAGGTACCGAGCCATAACAAGTGCATATTATCGAGGTGCTGTTGGTGCTTTGCTTGTCTATGATGTAACTCGTCATGTGACATTTGAAAATGTGGAACGATGGTTGAAGGAGCTCAGGGGCCACACAGATGCTAACATTGTCATCATGCTGGTTGGAAACAAGGCTGATCTTCGTCATCTTCGTGCAGTTACTATTGAAGATGCCATAGCTTTTTCTGAACGAGAAAATATGATTTTCATGGAAACCTCTGCTCTCGAGTCCTTGAATGTGGAAAAAGCCTTCACAGAAGTGTTAACACAAATATATCGTGTCGTAAGCAGGAAGGCCCTTGACATTGGAGACGACCCCATCTGCTTTGCCAAAAGGTCAGACGATCAACGTTGGTGGAAAGGATGA 615 0.439 MGSYRADDDYDYLFKVVLIGDSGVGKSNLLSRFSRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDANIVIMLVGNKADLRHLRAVTIEDAIAFSERENMIFMETSALESLNVEKAFTEVLTQIYRVVSRKALDIGDDPICFAKRSDDQRWWKG* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01926 204 SMART rho_sub_3 16 173 IPR001806 GO:0003924|GO:0005525
Pte2g01926 204 SMART ran_sub_2 19 201 - -
Pte2g01926 204 ProSiteProfiles small GTPase Rab1 family profile. 9 204 - -
Pte2g01926 204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 181 IPR027417 -
Pte2g01926 204 PRINTS Transforming protein P21 ras signature 37 53 - -
Pte2g01926 204 PRINTS Transforming protein P21 ras signature 152 174 - -
Pte2g01926 204 PRINTS Transforming protein P21 ras signature 14 35 - -
Pte2g01926 204 PRINTS Transforming protein P21 ras signature 55 77 - -
Pte2g01926 204 PRINTS Transforming protein P21 ras signature 117 130 - -
Pte2g01926 204 Gene3D - 6 188 IPR027417 -
Pte2g01926 204 NCBIfam small GTP-binding protein domain 12 170 IPR005225 GO:0005525
Pte2g01926 204 FunFam ras-related protein RABA1f 6 200 - -
Pte2g01926 204 SMART rab_sub_5 14 177 - -
Pte2g01926 204 ProSiteProfiles small GTPase Rho family profile. 7 178 - -
Pte2g01926 204 PANTHER DRAB11-RELATED 7 185 - -
Pte2g01926 204 Pfam Ras family 15 175 IPR001806 GO:0003924|GO:0005525
Pte2g01926 204 SMART ras_sub_4 11 177 - -
Pte2g01926 204 CDD Rab11_like 11 175 - -
Pte2g01926 204 ProSiteProfiles small GTPase Ras family profile. 2 204 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01926 Pte-Chr2 39554211 39556210 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01926 K07904 - rcu:8259172 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00984 19 8726992 8729610 Pte2g01926 2 39554211 39556210 RCT
Pte2g01926 2 39554211 39556210 Pte2g01926 2 39554211 39556210 RCT
Pte17g00451 17 5890848 5892887 Pte2g01926 2 39554211 39556210 RCT
Pte15g01892 15 24727114 24729524 Pte2g01926 2 39554211 39556210 RCT
Pte2g01926 2 39554211 39556210 Pte19g00984 19 8726992 8729610 RCT