Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02003 ATGGCCCCTATTCCCACTGCTTCTATTAATGCTGCTACTGGCCTTGCAAAGCCTGCCAGTGCATTAAGCCGTGCCTATGTTACTTTCTTGGCTGGCGATGGTGACTACTGGAAAGGTGTGGTTGGATTAGTCAAAGGTCTGAGAAAAGCCCAGAGTAAGTATCCTCTTGTGGTTGCCATCCTGCCAGATGTTCCTGAAGAACACAGGAAGATACTGGTCTCTCAAGGTTGTATAATCAGAGAAATCGTGCCAGTTTATCCTCCTTCCAACCAGAAAGAGTATGCCAGGGCATACTATGTCATCAATTACTCCAAGCTGCGTATTTGGGAGTTCGTCGAGTACAGCAAGCTGATTTACCTCGATGGGGATATCCAAGTTTTTGACAACATTGACCACCTTTTCGATTATCCTGACAATTACTTCTACGCTGTCATGGATTGCTTCTGCGATGAGATTTGGAGCAACACCAAGCAGTATAAAATCGGCTACTGCCAGCAGAACCCTAATAAGGTTCAATGGCCTGCTGAGTTTGGACCCAAACCCCCTCCCTACTTTAATGCAGGGATGTTTGTGTTTGAGCCTAATCTCTCTACTTACAGTGACCTCCTCAAAAGTTTGAAAGAAACTCCTCCAACCGCTTTCGCTGAGCAGGACTTCTTGAACATGTTCTTCAGGGACAAATACAAGCCCATCCCTAATAATTACAATCTTGTGTTGGCTTATCTGTGGCGTCACCCTGAGAACGTTCAGCTGGATAATGTCAAAGTCGTTCACTACTGTGTCGCAGGGTCTAAGCCATGGAGGTATACAGGTAAGGAAGACTACATGGATAGGGAAGACGTGAAGATGCTTGTGCAAAAATGGTGGGATATCTTTGAGGACGAGTCATTGGACTACAGAAACAGCGCAATGAATATGGACCCATTTATGGCGGCCCGTCTGGAGGCTGGTGTTATGCATATTTCCGCCCCATCTGCCGCCTAG 984 0.4644 MAPIPTASINAATGLAKPASALSRAYVTFLAGDGDYWKGVVGLVKGLRKAQSKYPLVVAILPDVPEEHRKILVSQGCIIREIVPVYPPSNQKEYARAYYVINYSKLRIWEFVEYSKLIYLDGDIQVFDNIDHLFDYPDNYFYAVMDCFCDEIWSNTKQYKIGYCQQNPNKVQWPAEFGPKPPPYFNAGMFVFEPNLSTYSDLLKSLKETPPTAFAEQDFLNMFFRDKYKPIPNNYNLVLAYLWRHPENVQLDNVKVVHYCVAGSKPWRYTGKEDYMDREDVKMLVQKWWDIFEDESLDYRNSAMNMDPFMAARLEAGVMHISAPSAA* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02003 327 PANTHER GLYCOGENIN SUBFAMILY MEMBER 22 300 - -
Pte18g02003 327 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 22 300 IPR029044 -
Pte18g02003 327 FunFam Hexosyltransferase 22 300 - -
Pte18g02003 327 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 298 IPR029044 -
Pte18g02003 327 CDD GT8_Glycogenin 24 294 - -
Pte18g02003 327 Pfam Glycosyl transferase family 8 28 270 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02003 Pte-Chr18 30473549 30475348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02003 6 328 Glycosyltransferase AT1G56600 69.369 2.41e-172 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02003 K18819 - pop:7465228 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g02003 18 30473549 30475348 Pte18g02003 18 30473549 30475348 RCT
Pte18g02003 18 30473549 30475348 Pte15g00125 15 957345 959261 RCT