Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00125 ATGGCCCCTGATCTCATAGTTGCTGCCACTGGTCTTGCCAAATCTTCCAGTTCACCCAGCCGTGCTTACATTACTTTCTTGGCTGGCAATGGCGATTACTGGAAAGGTGTGGTAGGATTGGTCAAGGGTCTTAGAAAAGTACAGAGTAAGTACCCTTTAGTGGTTGCCATCTTACCTGATGTTCCTGAAGAACACAGGAAGATCCTGATCTCTCAGGGTTGTATGCTGAGAGAGATTGAGCCAGTGTACCCTCCTTCAAATCAGACTGAGTTTGCAATGGCATATTATGTCATCAACTACTCCAAGCTTCGTATTTGGGAGTTTGTCGAGTACAGCAAGATGATCTACCTTGACGGTGATATCCAAGTTTTCGACAATATCGACCACCTCTTTGAGTTTCCAGACAATTACTTTTACGCCGTCATGGACTGTTTCTGCGAGCTCACATGGAGCCACACCAAGCAATTTGAAATTGGATACTGTCAGCAGTGCCCTGACAAAGTTCAATGGCCTGAAGAGTTTGGACCAAGACCACCTCTCTACTTCAATGCAGGAATGTTCGTGTTTGAGCCTAATCTGTCAACGTACCACGATCTTCTCAAAACTTTGAAAGAAACCACTCCTACCTCTTTTGCTGAGCAGGACTTCTTGAACATGTTCTTCAGGGATAAATACCGGCCCATCCCCAATGTGTACAACCTTGTGTTGGCCATGTTGTGGCGTCACCCTGAGAACGTTGAGCTTGACAAAGTAAAAGCTGTTCACTACTGCGCTGCGGGATCTAAGCCTTGGAGTTATACTGGCAAGGAAGAAAATATGGGGAGGGAAGACATCAAGATGCTTGTGAATAAGTGGTGGGATATCTTTGAGGATGAGTCACTGGACTACGAAAACTGTGTTTTGAAACTCAGCCCTTTCATGGCGGCCCTATCAGAGGCTGGTGCCGTAGAGCACATTTCTGCCCCATCGGCCGCTTAG 978 0.4652 MAPDLIVAATGLAKSSSSPSRAYITFLAGNGDYWKGVVGLVKGLRKVQSKYPLVVAILPDVPEEHRKILISQGCMLREIEPVYPPSNQTEFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFEFPDNYFYAVMDCFCELTWSHTKQFEIGYCQQCPDKVQWPEEFGPRPPLYFNAGMFVFEPNLSTYHDLLKTLKETTPTSFAEQDFLNMFFRDKYRPIPNVYNLVLAMLWRHPENVELDKVKAVHYCAAGSKPWSYTGKEENMGREDIKMLVNKWWDIFEDESLDYENCVLKLSPFMAALSEAGAVEHISAPSAA* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00125 325 SUPERFAMILY Nucleotide-diphospho-sugar transferases 24 300 IPR029044 -
Pte15g00125 325 FunFam Hexosyltransferase 19 297 - -
Pte15g00125 325 CDD GT8_Glycogenin 21 291 - -
Pte15g00125 325 PANTHER GLYCOGENIN SUBFAMILY MEMBER 17 294 - -
Pte15g00125 325 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 19 296 IPR029044 -
Pte15g00125 325 Pfam Glycosyl transferase family 8 25 267 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00125 Pte-Chr15 957345 959261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00125 1 326 Glycosyltransferase AT1G56600 72.619 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00125 K18819 - cave:132172140 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00125 15 957345 959261 Pte15g00125 15 957345 959261 RCT
Pte18g02003 18 30473549 30475348 Pte15g00125 15 957345 959261 RCT