Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00293 ATGTTACATGAATTTATAATGAATCGCACAATCTGCTTCTTCTCCCTGAAACCAGGGGCAGTTAAAAAAATCCGGAAGCCAAAGCCTTGGAAGCATCCTCAGCCAATAACAAAGAGTCAACTAATGCATTTGCGTGAAGAATTTTGGGACACAGCTCCTCACTATGGTGGCAGGAAAGAGATTTGGGATGCACTTCGAGCTGCTGGAGAAGCTGACCTTAGCTTAGCACAAGCAATAGTGGATAGTGCTGGAGTCATTGTTCAGAACGCTGATCTGACTGTATGCTATGATGAAAGAGGAGCCAAGTATGAACTACCGAAATATGTCCTGAGCGAGCCAACCAACCTGATAGCAGACATTTGA 363 0.4435 MLHEFIMNRTICFFSLKPGAVKKIRKPKPWKHPQPITKSQLMHLREEFWDTAPHYGGRKEIWDALRAAGEADLSLAQAIVDSAGVIVQNADLTVCYDERGAKYELPKYVLSEPTNLIADI* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00293 120 Gene3D - 37 110 IPR038169 -
Pte17g00293 120 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 22 118 IPR039869 -
Pte17g00293 120 Pfam Ubiquitin-binding domain 22 119 IPR032752 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00293 Pte-Chr17 3991071 3993819 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00293 - - ini:109150476 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00293 17 3991071 3993819 Pte15g01624 15 14235190 14238514 RCT
Pte17g00293 17 3991071 3993819 Pte17g00293 17 3991071 3993819 RCT