Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01624 ATGGGGTGTGCTGGATCGTCAGAGACCAAAAGAGACGGGACAGCAAAAAAGATCCGGAAACCTAAGCCATGGAAGCATCCTCAGCCAATAACAAAGACAGAGCTAATGCAGATGCGTGAAGAATTTTGGGATACAGCTCCTCACTATGGTGGCAGGAAAGAGATTTGGGATGCCATTCGAGCTGCTGTAGAAGCTGAGCTTAGCTTAGCACAAGCGATTGTGGATAGTGCAGGAGTCATTGTTCAAAATGCTGATATGACTGTATGCTATGATGAAAGAGGTACTGCCCTTATTTCATTTTTCCCGTTCACCATATCTACAAGTGAAAGGAATGAAAAGAACAACCAAACACTATATAAGAACTTGTAG 369 0.4336 MGCAGSSETKRDGTAKKIRKPKPWKHPQPITKTELMQMREEFWDTAPHYGGRKEIWDAIRAAVEAELSLAQAIVDSAGVIVQNADMTVCYDERGTALISFFPFTISTSERNEKNNQTLYKNL* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01624 122 MobiDBLite consensus disorder prediction 1 31 - -
Pte15g01624 122 Pfam Ubiquitin-binding domain 16 95 IPR032752 -
Pte15g01624 122 Gene3D - 31 97 IPR038169 -
Pte15g01624 122 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 1 95 IPR039869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01624 Pte-Chr15 14235190 14238514 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01624 - - qsu:112023216 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00293 17 3991071 3993819 Pte15g01624 15 14235190 14238514 RCT
Pte15g01624 15 14235190 14238514 Pte15g01624 15 14235190 14238514 RCT