Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00208 ATGGCCACCACTACTGCTTCAGATGATTCTAAAGATCATTCTACTCTGACTAAAGGAGATTCTGAGGAGGACAAGTCACTTGTTGTCTGCTTTGGAGAAATGTTGATTGATTTTGTGCCCACTGTTGGTGGAGTCTCACTTGCTGAAGCACCCGCTTTTAAGAAAGCTCCTGGTGGTGCTCCTGCTAACGTGGCAGTTGGGGTTGCAAGACTTGGCAGTTCCTCTGCATTTATCGGAAAGGTTGGGAAGGACGAATTTGGCTACATGTTGGCTGACATTTTGAAGCAAAACAGAGTTGATGTAACTGGTATTCGGTATGATTCTAATGCAAGGACTGCACTTGCTTTTGTTACCCTTAGAGCTGATGGTGAGCGTGAGTTCCTGTTTTTCCGAAATCCAAGTGCTGATATGCTTCTTCACGAATCTGAACTGGAAATAAATGTTATAAAACAGGCTAGAATCTTCCATTATGGTTCCATTAGCTTGATTGCAGAGCCATGTAAATCAGCTCATCTTGCTGCAATGAGGATAGCCAAAAGCTCAGGTTCTATCCTATCTTATGATCCAAATTTGAGATTGGCATTGTGGCCATCTGCTGAGGCTGCTCGTGATGGCATTTTGAGTATATGGAATCAAGCAGACATTATTAAGATAAATGAGGATGAAATCTCATTCTTGACTGGTGGTGATGATCCTTTTGATGATAACGTTGTCATCAAGAAGCTCTTCCATCCTAATCTTAAGCTTTTGATTGTAACAGAAGGTGCAGCGGGCTGCAGATATTTCACTAAGGATTTTAAAGGAAGGGTGGGAGGTGTTAAAGTTAAGCCTGTTGACACAACCGGTGCTGGTGATGCATTTGTCAGTGGAATACTGTATAACATAGCTTCCAATCCAAATATTTTACAGGATGAAAAGGGTCTGCGGGATGCTCTATTTTTCGCAAATTTATGTGGTGCCCTCACTGTAACAGAAAGAGGAGCCATTCCTGCACTACCCACAAAAGATGCTGTGCTTCAATTTATAGAAAAAGAGTCTCGCTAA 1044 0.4215 MATTTASDDSKDHSTLTKGDSEEDKSLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGVARLGSSSAFIGKVGKDEFGYMLADILKQNRVDVTGIRYDSNARTALAFVTLRADGEREFLFFRNPSADMLLHESELEINVIKQARIFHYGSISLIAEPCKSAHLAAMRIAKSSGSILSYDPNLRLALWPSAEAARDGILSIWNQADIIKINEDEISFLTGGDDPFDDNVVIKKLFHPNLKLLIVTEGAAGCRYFTKDFKGRVGGVKVKPVDTTGAGDAFVSGILYNIASNPNILQDEKGLRDALFFANLCGALTVTERGAIPALPTKDAVLQFIEKESR* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00208 347 PRINTS Ribokinase signature 208 223 IPR002139 GO:0016301
Pte16g00208 347 PRINTS Ribokinase signature 250 261 IPR002139 GO:0016301
Pte16g00208 347 PRINTS Ribokinase signature 53 72 IPR002139 GO:0016301
Pte16g00208 347 FunFam Probable fructokinase-2 25 346 - -
Pte16g00208 347 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 279 292 IPR002173 GO:0016301
Pte16g00208 347 Pfam pfkB family carbohydrate kinase 26 334 IPR011611 -
Pte16g00208 347 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 58 82 IPR002173 GO:0016301
Pte16g00208 347 PANTHER HEXOKINASE FAMILY MEMBER 27 342 - -
Pte16g00208 347 CDD bac_FRK 27 329 - -
Pte16g00208 347 SUPERFAMILY Ribokinase-like 28 342 IPR029056 -
Pte16g00208 347 Gene3D - 24 347 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00208 Pte-Chr16 2424184 2615913 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00208 K00847 - qsa:O6P43_008290 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00208 16 2424184 2615913 Pte9g00278 9 3116981 3121006 RCT
Pte16g00208 16 2424184 2615913 Pte16g00208 16 2424184 2615913 RCT