Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00800 ATGGATATTCGCCGGCGACCAATGAACGCCGAATCTCAACTCAAAACTCATCAGCTTAAGCAGCAGCAGCAGATGAAGTCGGAGACCGAACAGCAGCAGCAGCAGTCACCTATTCCTCTGTTCACTCTGTTGTACGTCATGAATGGTGTTTTTTTCTTCTTGTTCTTCTTGACGGCGTGCTTTCTTCTTCACAGATGGCGTGATAAGATCCGCACTTCGACCCCTCTTCATGTTTTGATGTTCTCTGAGATTATTGCTATTTGTTTTCTGATTGTCTCTGTTATTTACCTTCTGGGTTTCTTCGGCATTGGATTTATTCATTCTATCACCTCTCGTGCTACGTCTGATGATGAGTTTGAGCTAGAAGATGAGGATGGGAATACTAAGCTCATTGCCAAGGAGGATACCCGTGCACCTGGCTCTTGCGGTGCTGGTGTGATCGACTGCTCTGTCGTCACAACTGCTCAGCAGCAGACCCAGATGGTGATTGCTGCACCGACATCAAAGGTGTTTGACATGACGCCTATACCCTTATCTGATGACGATAAGGAGGTTGTGAAGGCGGTGGTGTCGGGTTCGACGCCGTCGTATTCGTTGGAGTCAAAGCTCGACGATTGCATAAAAGCTGCGGCAATTAGAAGAGAAGCGGTGCAGAGGCTGACGGATAAGTCGCTTGCTGGGTTGCCTTTAGAGGGGTTCGATTACGATTCAATTTTGGGACAGTGCTGTGAGATGCCAATCGGGTACGTTCAGATACCGGTTGGCGTGGCAGGACCTCTGTTACTTGATGGGAAAGAGTACACTGTTCCGATGGCTACGACAGAGGGTTGTCTAGTAGCTAGCACAAACAGGGGCTGCAAAGCTATTCACCTCTCTGGTGGAGCTACATCTGTGCTACTTAGAGATGGGATGACCAGAGCTCCTGTTGTTCGGTTTCCTACTGCCATGAGGGCCGCCCAATTGAAGTTCTTCTTGGAAGATCCGATGAATTTCGATGCACTTTCTGCCGTTTTCAATAGGTCAAGTAAGTTTGCAAGGTTACAAAATATCCAGTGTGCTATAGCAGGCAAAAATTTGTACATCAGATTCACTTGCAGCACAGGAGATGCCATGGGGATGAACATGGTTTCTAAAGGAGTCCAGAACGTCCTTGATTACCTTCAGAACGACTTTCCTGACATGGATGTCATAGGTATATCTGGAAACTTCTGTTCTGACAAGAAGCCAGCTGCTGTCAACTGGATTGAGGGGCGTGGGAAATCGGTCGTATGCGAGGCAATCATTACGGAGGAGGTAGTGAAGAAAGTATTGAAGACCAACGTAGCTGCCCTCGTGGAGCTTAACATGCTTAAAAACCTTGCTGGCTCAGCTGTCGCTGGTGCCCTGGGTGGTTTCAATGCGCATGCTAGCAATATTGTTTCTGCAATCTACATTGCCACTGGTCAGGATCCTGCTCAGAATGTGGAGAGCTCTCACTGTATCACCATGATGGAAGCTGTGAATGATGGCAGGGACCTTCACATCTCTGTCTCCATGCCTTCAATTGAGGTGGGCACAGTAGGAGGGGGCACACAGCTGGCATCCCAGTCAGCTTGTCTAAACCTACTTGGCGTTAAGGGTGCCAGCACAGAGACACCCGGTGCAAATGCTAGGCTATTAGCAACCATAGTAGCTGGTTCAGTCCTAGCTGGAGAGCTCTCCCTCATGTCTGCCCTTGCAGCTGGGCAGCTAGTCAACAGCCACATGAAATACAACCGATCAAGCAAGGATATGTCCAAGGTAGCTTCCTCCTAA 1794 0.4872 MDIRRRPMNAESQLKTHQLKQQQQMKSETEQQQQQSPIPLFTLLYVMNGVFFFLFFLTACFLLHRWRDKIRTSTPLHVLMFSEIIAICFLIVSVIYLLGFFGIGFIHSITSRATSDDEFELEDEDGNTKLIAKEDTRAPGSCGAGVIDCSVVTTAQQQTQMVIAAPTSKVFDMTPIPLSDDDKEVVKAVVSGSTPSYSLESKLDDCIKAAAIRREAVQRLTDKSLAGLPLEGFDYDSILGQCCEMPIGYVQIPVGVAGPLLLDGKEYTVPMATTEGCLVASTNRGCKAIHLSGGATSVLLRDGMTRAPVVRFPTAMRAAQLKFFLEDPMNFDALSAVFNRSSKFARLQNIQCAIAGKNLYIRFTCSTGDAMGMNMVSKGVQNVLDYLQNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAIITEEVVKKVLKTNVAALVELNMLKNLAGSAVAGALGGFNAHASNIVSAIYIATGQDPAQNVESSHCITMMEAVNDGRDLHISVSMPSIEVGTVGGGTQLASQSACLNLLGVKGASTETPGANARLLATIVAGSVLAGELSLMSALAAGQLVNSHMKYNRSSKDMSKVASS* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00800 597 Pfam Hydroxymethylglutaryl-coenzyme A reductase 210 586 IPR002202 GO:0004420|GO:0015936
Pte14g00800 597 Gene3D - 303 419 IPR009023 -
Pte14g00800 597 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 178 252 - -
Pte14g00800 597 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 1. 362 376 IPR023076 GO:0004420
Pte14g00800 597 ProSiteProfiles Hydroxymethylglutaryl-coenzyme A reductases family profile. 182 586 IPR002202 GO:0004420|GO:0015936
Pte14g00800 597 SUPERFAMILY NAD-binding domain of HMG-CoA reductase 303 419 IPR009023 -
Pte14g00800 597 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 400 425 IPR002202 GO:0004420|GO:0015936
Pte14g00800 597 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 505 526 IPR002202 GO:0004420|GO:0015936
Pte14g00800 597 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 269 289 IPR002202 GO:0004420|GO:0015936
Pte14g00800 597 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 451 477 IPR002202 GO:0004420|GO:0015936
Pte14g00800 597 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 242 263 IPR002202 GO:0004420|GO:0015936
Pte14g00800 597 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 360 378 IPR002202 GO:0004420|GO:0015936
Pte14g00800 597 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 2. 517 524 IPR023076 GO:0004420
Pte14g00800 597 Gene3D - 253 581 IPR023074 GO:0004420
Pte14g00800 597 MobiDBLite consensus disorder prediction 1 31 - -
Pte14g00800 597 Gene3D - 179 252 IPR023282 GO:0004420
Pte14g00800 597 NCBIfam hydroxymethylglutaryl-CoA reductase (NADPH) 182 586 IPR004554 GO:0004420|GO:0005515|GO:0008299
Pte14g00800 597 SUPERFAMILY Substrate-binding domain of HMG-CoA reductase 178 575 IPR009029 GO:0015936|GO:0016616
Pte14g00800 597 CDD HMG-CoA_reductase_classI 183 586 IPR004554 GO:0004420|GO:0005515|GO:0008299
Pte14g00800 597 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 3. 571 584 IPR023076 GO:0004420
Pte14g00800 597 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 408 581 - -
Pte14g00800 597 PANTHER 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE 10 590 IPR002202 GO:0004420|GO:0015936
Pte14g00800 597 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 303 419 - -
Pte14g00800 597 MobiDBLite consensus disorder prediction 12 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00800 Pte-Chr14 29507339 29512013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00800 1 592 Lipid Metabolism Gene Families AT1G76490 66.502 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00800 K00021 - qsa:O6P43_024982 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00800 14 29507339 29512013 Pte12g00572 12 5135742 5139634 RCT
Pte14g00800 14 29507339 29512013 Pte14g00800 14 29507339 29512013 RCT