Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01493 ATGGCGTTGTCCAACACTTGCAATTGTAAAGTCTCTTCCTTCTGTCCCAATCCTCCTTCCTCTTCCACTCTTTTCCGCAAATTCCCTTTTCGCACTCTCACCTTTGCTTCTCTCCCTTCCCCGAAACCGGGCGCCCCATGGGTCACGAAATCCCCCCCTCCCAAAAGCGTCTCCGACCAGCCCACATCGGAGAACAAACCCCAGAACGCCGTTGAGAGAATCGTCCTCCGCCTACGCAACCTGGGCCTGCCCTCTGAAGATGAACAGCTACAAGAAGAATATGTTCCCCCGGCGGTGACCGGAGATGAGCGTCTCGGCGACTTGCTCCGGCGGGAGTGGGTGAGGCCGGACGCCGTGGAGACTGAGGAGGAAGAGATGGTGCTGCCGTGGGAGAGGGAAGAGGAGAAGGTGAAGGTGAAGGTGTGGAGTGAGGAGTGGCTTAAGAAGAGGAGGGTTAGGGCTCCTAGTTTGGCTGATTTAACCCTTGAAGATGATTTGCTGAGGCGGTTGAGGAGAGAGGGTATGCGTGTAAGGGAGAGGGTTAGCGTCCCCAAGGCTGGATTCACTCCTGAGGTCATGGACAAGATTCATAAGAGGTGGGCCAAGGATGAGTTGGTCAGGCTCAAGTTTCATGAGGATCTTGCCCGTGACATGAGCTTGGCTCATCACATCGTTGAGCGCCGAACCGGAGGATTGGTTACATGGAGGTCTGGAAGTGTTATGATGGTGTATCGTGGTATTCATTACCAAGGACCTGACTCACGGATGGAAGTTAATGCGAAAAAAGGTGATGGTTTTTTTGTGCCAGATGTCTCATCGGGAAGTTTGTTGAAAAGTGCAGACAATAATACAGCCTTGTCTCTGGAGAAGAGTGAGGTGGTTATAAAGGAGCGGGAACAGCCTGAGAATGTGTCAGAGGCAGAAGCAGAGTACAATGCACTCCTTGATGGTTTAGGTCCTCGTTTTGTTGGATGGTGGGGCACGGGAATACTTCCTGTTGATGCTGATTTGCTTCCCCGGACTGTTCCTGGTTACAAAACACCTTTTAGGCTTCTTCCTACTGGAATGCGTTCTCGGCTCACAAATGCAGAGATGACCAATTTAAGAAAGCTTGCAAAATCACTTCCTTGTCATTTTTCCTTAGGGAGAAACAGAAATCACCAAGGTCTGGCATGCGCTATTCTTAAGCTCTGGGAGAAAAGCTTAGTTGCAAAGATTGCTGTCAAACGTGGGATCCAGAATACAAACAATGAATTGATGGCTGAGGAGCTGAAGATGTTAACAGGAGGTACCTTGCTGCTAAGGAATAAATATTTCATTGTAATATACCGTGGGAAAGACTTTGTTCCAACAAGTGTGGCTGCAGTCTTATCTGAAAGAGAGGAATTGACCAAACAGGTACAGGATGTTGAAGACAAGATGCGGCGCAGACTCAGAGCAGTTGATGCAATTCCATCAGTGCAAGGTGAAGCTACAGCACAGGCTGGGACTTTAGCAGAGTTCTATGAGGCCCAGGCTCGATGGGGAAGAGAAATATCTGCTGAAGAACGAGAGAAGATGGCCCAGACCAAAAAGCATAGAGCAGAAAAACTGTTAGCCAAAATAGAAGCATCTATGGTTCCAGCTGGTCCAGATTATGACCAGGAAACAATCACAGATGAAGAACGGTTTATGTTCCGTAAAGTTGGTTTAAGAATGAAGCCATATTTACCACTTGGTATACGTGGTGTTTTTGACGGTGTTGTTGAGAATATGCATTTGCATTGGAAACACCGAGAACTTGTAAAATTGATGACAAAACAAAAGACTCTTGCTTTTGTTGAAGACACAGCAAGGTTACTGGAATACGAGAGTGGTGGAATACTGGTGGCAATAGAAAAAGTTTCCAAAGAATTTGCTCTTATTTACTATCGTGGAAAGAATTATAAACGACCCATCACCCTGAGGCCTAGGAACCTTCTAACGAAGGGAAAGGCATTAAAGCGTCATGTAGCCATGCAACGTCATGAGGCTCTGACTCAGCATATTTCCGAATTGGAAAAAACTATAGAACAAATGAAAAAAGAACTTGGTATGACTGAAGATTCAGATGGTTTTGATGATGAGGAAGAGCTTCATAGCCAAATAGAGGGCATCTCAGAATTGACCCTAAGTGAGGATGAAGGTTCTGATGGTTTTGAAGATGAGGAAGACAGTGATTGGGATGAAGACGAGGACTCTGAGTTTTCAGAATTTATAAATGATGAACATCCTTGA 2256 0.4654 MALSNTCNCKVSSFCPNPPSSSTLFRKFPFRTLTFASLPSPKPGAPWVTKSPPPKSVSDQPTSENKPQNAVERIVLRLRNLGLPSEDEQLQEEYVPPAVTGDERLGDLLRREWVRPDAVETEEEEMVLPWEREEEKVKVKVWSEEWLKKRRVRAPSLADLTLEDDLLRRLRREGMRVRERVSVPKAGFTPEVMDKIHKRWAKDELVRLKFHEDLARDMSLAHHIVERRTGGLVTWRSGSVMMVYRGIHYQGPDSRMEVNAKKGDGFFVPDVSSGSLLKSADNNTALSLEKSEVVIKEREQPENVSEAEAEYNALLDGLGPRFVGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFSLGRNRNHQGLACAILKLWEKSLVAKIAVKRGIQNTNNELMAEELKMLTGGTLLLRNKYFIVIYRGKDFVPTSVAAVLSEREELTKQVQDVEDKMRRRLRAVDAIPSVQGEATAQAGTLAEFYEAQARWGREISAEEREKMAQTKKHRAEKLLAKIEASMVPAGPDYDQETITDEERFMFRKVGLRMKPYLPLGIRGVFDGVVENMHLHWKHRELVKLMTKQKTLAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYKRPITLRPRNLLTKGKALKRHVAMQRHEALTQHISELEKTIEQMKKELGMTEDSDGFDDEEELHSQIEGISELTLSEDEGSDGFEDEEDSDWDEDEDSEFSEFINDEHP 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01493 751 FunFam CRM-domain containing factor CFM3B, chloroplastic 550 652 - -
Pste9g01493 751 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 38 728 IPR045278 GO:0000375|GO:0003729
Pste9g01493 751 ProSiteProfiles CRM domain profile. 358 455 IPR001890 GO:0003723
Pste9g01493 751 SUPERFAMILY YhbY-like 550 648 IPR035920 -
Pste9g01493 751 Pfam CRS1 / YhbY (CRM) domain 552 627 IPR001890 GO:0003723
Pste9g01493 751 Pfam CRS1 / YhbY (CRM) domain 164 245 IPR001890 GO:0003723
Pste9g01493 751 Pfam CRS1 / YhbY (CRM) domain 360 444 IPR001890 GO:0003723
Pste9g01493 751 Coils Coil 453 480 - -
Pste9g01493 751 Gene3D - 359 452 IPR035920 -
Pste9g01493 751 Gene3D - 160 258 IPR035920 -
Pste9g01493 751 ProSiteProfiles CRM domain profile. 160 256 IPR001890 GO:0003723
Pste9g01493 751 MobiDBLite consensus disorder prediction 53 68 - -
Pste9g01493 751 Gene3D - 551 655 IPR035920 -
Pste9g01493 751 MobiDBLite consensus disorder prediction 720 744 - -
Pste9g01493 751 MobiDBLite consensus disorder prediction 712 751 - -
Pste9g01493 751 SUPERFAMILY YhbY-like 360 451 IPR035920 -
Pste9g01493 751 Coils Coil 669 696 - -
Pste9g01493 751 SMART CRS1_YhbY_2 360 444 IPR001890 GO:0003723
Pste9g01493 751 SMART CRS1_YhbY_2 551 638 IPR001890 GO:0003723
Pste9g01493 751 SMART CRS1_YhbY_2 162 245 IPR001890 GO:0003723
Pste9g01493 751 SUPERFAMILY YhbY-like 161 251 IPR035920 -
Pste9g01493 751 MobiDBLite consensus disorder prediction 41 68 - -
Pste9g01493 751 ProSiteProfiles CRM domain profile. 549 649 IPR001890 GO:0003723
Pste9g01493 751 FunFam CRS2-associated factor 1, chloroplastic 359 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01493 Pste-Chr9 14649543 14654718 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01493 9 14649543 14654718 Pste9g01493 9 14649543 14654718 ECH
Pste3g00295 3 1412058 1417305 Pste9g01493 9 14649543 14654718 PCT