Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00295 TCAACGAACACATGATGTCAATACGATACTGCCTAGTGCGATCAGTGGATTACGATTACGATTATGCAAATGTTGGTATGCTAAATAAACTCAGGATAGATGGCATTAGGGTGGATGAAAAATTTAAAGGAAGGTTTTAATAAGAAGCAGTGTTAAATATCTGGAGGGGAGAAATAGGGTTAAATATCTTGAAGGCTTTGTGATACGGGCAAGTGTAAATCCAAAGATAGAAAAAGAGAAAATGCAAGACAGTTGGTGAAGATGCGATTGAGCATCACCACTGCTTTACTATCAGCACTTCCACTGGCTTCACCCTCCATATTCAAATTCTCCAACCTTGGAATTCGCATTCGCGCTATCAACTCCTCCTCCTCTTCTCTCTCAACCACTCGTCACCACCACAACCACGACGACTTGTTCCACCCTCTCCCCAACCACCTCCACCTCCACGAAGCCGCCAACGCCATCGAGAGAATCGCCCTCCGCTTGCGTAACTTAGGGTTAGCTTCGGCTGACTACACCGAGAACGACGATTTCCTGCGCCGCGAATGGCTTCGTCCCGACGAGGCGCTTCTGCCGTGGGACAAGGACGAAGACGAAGAAGAGGAAAAGGAGAAGCTAAAGAAGAAGGTTAATGCACCGACACTGGCCGAACAAACGCTTGAGGAGGAAGAGCTGCGCCGATTGCGGACTCTGGGAATGCGTCTTAAGGAGAAGGTTACCATCCCCCAAGCTGGCCTCACAACACCCGTGCTCCACAAAATTCACAATCACTGGAGCAACTGCGAGTTGGTGAGGCTCAAGTTTCACGACCTTCTTGCTCACAACATGAAGTTGGCTCATCAAATTGTCGAGCGTAGAACTGGAGGGTTAGTCATATGGAGGTCGGGGAGTTATATGTGGGTGTACCGTGGTAGGAATTACCAGGGGCCGACACAACAGAGTGAAAAGGAAGGTGATCGTCAAATTTCTGTGATGGTGGAGAGTGATATAGCATCCTTGGAAAAGAGTGAGGCAGTTAGGTGGAAGGAGGAGAACATGACCCTGGAGGAAGCAGAGTTCAACATGATGCTTGACAGCTTTGGTCCTCGATTTGTAGAATGGTGGGATACTGGAATACTTCCTGTTGATGCGGATTTACTTCCCCCTACGGTTCCTGGTTACAAGACACCTCTTAGGCTTCTTCCTGCTGGAATGCATCCACGACTAACCAATGATGAACTGACAAATATGCGGAAGCTTGCTAAAGCTCTTCCTTGTCACTTTGCCTTGGGGAGAAATAGAAATCTTCAAGGTCTAGCATCTGCTATTCTTAGGCTTTGGGAGAAAAGTTTAGTTGCAAAGATTGGTGTCAAGCGTGGTATGGTGAATACAAACAATGAACTGATGGCTCAGGAACTAAAGAAATTAACAGGAGGTACCTTATTGCTAAGGAATAAATATTACATTGTAATATATCGTGGGAAGGACTTTGTTCCAACAAGTGTGGCTGCTGTTATTGCTGAAAGACAGGAATTGACAAAACAAGTGCAGGATGTTGAGGAGAAGGTGCGGTGCAAGGCTGTTGATGTAACTTTATCAGGAGAAGGTGAATCAACAGCACAAGCAGGATCATTGGCTGAGTTCTATGAGTCTCAGGCATGCTGGGGAAGGGATGTATCTACTGAAGAACGTGAGAGGATGATGCATGAGGTTGCTAAAGCCAAAAATGCTAAGCTTGTCAAAAAAATTGAACGTAAACTAGCTGTTGCAGAGGCCAAAAAGCTTACAACAGAAAAGTTGTTAGCTAAAATAGAAGCATCCTTGGTTCTGGTTGGTCCTGATTATGACAAGGAAACAATAACAGATGAAGAACGTGTTATGTTCCGTTCAGTTGGTTTAAGAATGAAGGCATACTTGCCACTTGGTATACGTGGTGTTTTTGATGGTGTCATTGAGAATATGCATTTGCATTGGAAACATCGAGAACTTGTTAAACTAATAACAAAACAAAAAACCCTTGCTTTTGTTGAAGATACAGCTAGATTACTGGAATACGAGAGTGGTGGAATACTAGTAGCAATAGATAAAGTTCCTAAAGGATTTTCTCTTATTTACTATCGTGGAAAGAATTATAGACGACCTATGACTCTGAGGCCTAAAAACCTTCTAACGAAGGCAAAGGCATTACAGCGTTCAATAGCCATGCAGCGGCATGAGGCTCTGAGTCAGCATGTACATGAATTGGGGAAAAAAATAGAAGAAATGAAAAAAGAACTTGTTTTGTCTCAAAATTTGGGACTTGAAGATAGGTGGAATGTAGAGGACCACAACCAGATAGACCATACAACAGAATTCGCCCAAAGTGACGATGAATACTCCGGTGGTGATTTCATTGCGGAGGAATACAGTGATTGCAATGATGAGGAATCTGAATTTACTTAG 2424 0.4398 MRLSITTALLSALPLASPSIFKFSNLGIRIRAINSSSSSLSTTRHHHNHDDLFHPLPNHLHLHEAANAIERIALRLRNLGLASADYTENDDFLRREWLRPDEALLPWDKDEDEEEEKEKLKKKVNAPTLAEQTLEEEELRRLRTLGMRLKEKVTIPQAGLTTPVLHKIHNHWSNCELVRLKFHDLLAHNMKLAHQIVERRTGGLVIWRSGSYMWVYRGRNYQGPTQQSEKEGDRQISVMVESDIASLEKSEAVRWKEENMTLEEAEFNMMLDSFGPRFVEWWDTGILPVDADLLPPTVPGYKTPLRLLPAGMHPRLTNDELTNMRKLAKALPCHFALGRNRNLQGLASAILRLWEKSLVAKIGVKRGMVNTNNELMAQELKKLTGGTLLLRNKYYIVIYRGKDFVPTSVAAVIAERQELTKQVQDVEEKVRCKAVDVTLSGEGESTAQAGSLAEFYESQACWGRDVSTEERERMMHEVAKAKNAKLVKKIERKLAVAEAKKLTTEKLLAKIEASLVLVGPDYDKETITDEERVMFRSVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLITKQKTLAFVEDTARLLEYESGGILVAIDKVPKGFSLIYYRGKNYRRPMTLRPKNLLTKAKALQRSIAMQRHEALSQHVHELGKKIEEMKKELVLSQNLGLEDRWNVEDHNQIDHTTEFAQSDDEYSGGDFIAEEYSDCNDEESEFT 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00295 720 Coils Coil 487 507 - -
Pste3g00295 720 Pfam CRS1 / YhbY (CRM) domain 134 217 IPR001890 GO:0003723
Pste3g00295 720 Pfam CRS1 / YhbY (CRM) domain 316 400 IPR001890 GO:0003723
Pste3g00295 720 Pfam CRS1 / YhbY (CRM) domain 528 614 IPR001890 GO:0003723
Pste3g00295 720 Coils Coil 645 665 - -
Pste3g00295 720 SUPERFAMILY YhbY-like 526 624 IPR035920 -
Pste3g00295 720 SMART CRS1_YhbY_2 134 217 IPR001890 GO:0003723
Pste3g00295 720 SMART CRS1_YhbY_2 527 614 IPR001890 GO:0003723
Pste3g00295 720 SMART CRS1_YhbY_2 316 400 IPR001890 GO:0003723
Pste3g00295 720 Gene3D - 315 408 IPR035920 -
Pste3g00295 720 Gene3D - 133 234 IPR035920 -
Pste3g00295 720 Gene3D - 526 627 IPR035920 -
Pste3g00295 720 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 89 698 IPR045278 GO:0000375|GO:0003729
Pste3g00295 720 ProSiteProfiles CRM domain profile. 132 228 IPR001890 GO:0003723
Pste3g00295 720 FunFam CRM-domain containing factor CFM3B, chloroplastic 526 628 - -
Pste3g00295 720 SUPERFAMILY YhbY-like 316 407 IPR035920 -
Pste3g00295 720 ProSiteProfiles CRM domain profile. 314 411 IPR001890 GO:0003723
Pste3g00295 720 FunFam CRS2-associated factor 1, chloroplastic 133 228 - -
Pste3g00295 720 Coils Coil 409 429 - -
Pste3g00295 720 FunFam CRS2-associated factor 1, chloroplastic 315 411 - -
Pste3g00295 720 ProSiteProfiles CRM domain profile. 525 625 IPR001890 GO:0003723
Pste3g00295 720 SUPERFAMILY YhbY-like 133 225 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00295 Pste-Chr3 1412058 1417305 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00295 3 1412058 1417305 Pste3g00295 3 1412058 1417305 ECH
Pste3g00295 3 1412058 1417305 Pste9g01493 9 14649543 14654718 PCT