Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01158 CAACCACACACACAAGAAGATAAGGAGTGAGTTAGTGATCATAATGTCTTCTTCTGGGTTTTCATCATCTTCCACTGCAGAGAAAGTTACTCAAGGAATCGATGGGACTGGAACAACCCATGGTATTGGTATCGAGACAACAAGAGTTCTTGCTTTGCGTGGTGTCCATGTGATTACAGGTGCAAGAGATGTGACTGCAGCAAAAGATGTGAAAGAAGCTATCCTTAAAGAGATTCCCACAGCTAAAGTTGAGGCCATGGAGTTAGATCTTAGTTCATTGGCATCCGTAAGAAACTTTGCATCAGAGTTCATTTCATCTGGTCTTCCATTGAACATCTTGATAAACAATGCTGGAATAAGTGCATTTCCTTTCACGCTGTCCAAAGACAACATCGAACTACAATTTGCCACAAATCACTTGGGTCATTTTCTTTTAACAAATCTTTTGTTGGATACAATGAAGAAAACTGCAAGTGAAAGTAACAAAGAAGGAAGAATTATTAATGTCTCTTCGGAAGGTCATAAATATACATATCCGGAAGGAATCCTTTTTGATAAAATTAATGATGAATCAAGTTACCAAAAGTGGCATGCATATGGACAATCAAAGCTTGCTAACATTTTACATGCTAAGGAACTGGCAAGACATCTTAAAGAAAATGGGATAAATATTACTGCAAATTCTCTTCATCCAGGAGCTATTATTACCAATATTTATAAACCAGAGCTTAGTGGTCCTGTGCCAACTGATCTAATGAATATTCTAGGAAATTATGTGCTTAAAACTGGCCAACAGAACATCATGTGGAGGCCGTTTAGCAGAAAAGGGAGTTCTGCATTTTCATCATTTTCCACTGCCGAGCAAGTTACTGAAGGGATCGATGGCACTGGCCTCACTGCTATTGTTACAGGGGCTGCCAGTGGTATTGGTGTTGAGACTACACGTGTGCTTGCTTTGCGTGGTGTTCATGTAATTATGGGGGTCAGAAATATGATTGCTGCAGAAGATGTTAAAGAAGCAATAATTAAGGAGATTCCCACAGCCAAAGTTGATGCTATGGAGTTGGACCTTAGTTCAATGGCTTCTGTTCGAAAATTTGCATCAAACTTTGTTTCATCTGGTCTTCCATTGAACATTTTGATTTACCACAAATGGCTTGCATATGGACAATCAAAGCTTGCCAACATTTTACATGCCAATGAACTTGCAAGACGTCTCAAGGAAGATGGAGTAGACATTACAGCTAATTCTCTTCATCCAGGAGCTATTGTCACCAATATTTTTCGTCACACTAGTGTAATGGCCGGTGTAGTTAATACGCTTGGAAGAGTCGTGTTTAAAAATGTTCAGCAGGGAGCAGCAACGACATGCTACGTAGCATTGCATCCTAAAGTGAGAGAAATCAGTGGCGAGTATTTTTCAAATTGTAACATTCTCACAGCAAACTCACTAGGAAGGGACATTGATTTGGCCAAGAAACTGTGGGATTTTAGTTCAAATTTGATT 1507 0.3935 MSSSGFSSSSTAEKVTQGIDGTGTTHGIGIETTRVLALRGVHVITGARDVTAAKDVKEAILKEIPTAKVEAMELDLSSLASVRNFASEFISSGLPLNILINNAGISAFPFTLSKDNIELQFATNHLGHFLLTNLLLDTMKKTASESNKEGRIINVSSEGHKYTYPEGILFDKINDESSYQKWHAYGQSKLANILHAKELARHLKENGINITANSLHPGAIITNIYKPELSGPVPTDLMNILGNYVLKTGQQNIMWRPFSRKGSSAFSSFSTAEQVTEGIDGTGLTAIVTGAASGIGVETTRVLALRGVHVIMGVRNMIAAEDVKEAIIKEIPTAKVDAMELDLSSMASVRKFASNFVSSGLPLNILIYHKWLAYGQSKLANILHANELARRLKEDGVDITANSLHPGAIVTNIFRHTSVMAGVVNTLGRVVFKNVQQGAATTCYVALHPKVREISGEYFSNCNILTANSLGRDIDLAKKLWDFSSNLI 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01158 488 PANTHER RETINOL DEHYDROGENASE 4 250 - -
Pste9g01158 488 Gene3D - 369 488 - -
Pste9g01158 488 Gene3D - 22 273 - -
Pste9g01158 488 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 282 459 IPR036291 -
Pste9g01158 488 PRINTS Glucose/ribitol dehydrogenase family signature 185 204 IPR002347 -
Pste9g01158 488 PRINTS Glucose/ribitol dehydrogenase family signature 208 225 IPR002347 -
Pste9g01158 488 PRINTS Glucose/ribitol dehydrogenase family signature 18 35 IPR002347 -
Pste9g01158 488 PRINTS Glucose/ribitol dehydrogenase family signature 144 160 IPR002347 -
Pste9g01158 488 PRINTS Glucose/ribitol dehydrogenase family signature 94 105 IPR002347 -
Pste9g01158 488 MobiDBLite consensus disorder prediction 1 23 - -
Pste9g01158 488 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 158 IPR002347 -
Pste9g01158 488 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 185 204 IPR002347 -
Pste9g01158 488 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 IPR002347 -
Pste9g01158 488 Pfam short chain dehydrogenase 285 367 IPR002347 -
Pste9g01158 488 Pfam short chain dehydrogenase 22 167 IPR002347 -
Pste9g01158 488 Gene3D - 274 368 - -
Pste9g01158 488 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 22 232 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01158 Pste-Chr9 9103611 9123930 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01158 22 230 Acyl Lipid Metabolism Gene Families AT3G55310 27.854 1.05e-07 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02927 4 20640631 20653930 Pste9g01158 9 9103611 9123930 PCT