Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01130 GTTTTAAATAGCTGTTACCTGTTTGAGTTCTCTTGTCAATTGTATAAAATTATTGCCAATGTGATTCATGCCGCTGCAATTGCATGAAATCTCCAAAAATACAATAGTGGGGCCTCAATTGATCAAAGGTTGTTGGGGTGATCTTCACAGTTTTGTTACTGGGACTACAAGGAGTGAGAGTTGCTGAATGCAGAGTAGCCACTGGTTTGCATGACCTTCAGTATTCTGCTATCAACTGCCGAAAACACAGTGCACTTTTGACTGATTTTGGTGGTGTTGGTGACGGAAAAACATCTAACACAAAGGCCTTTCATTATGCAATTAGCAATCTCAGCCAATATGCATCTGATGGTGGTGCTCTACTTGTTGTGCCACCTGGAAAATGGCTAACAGGAAGCTTCAACCTCACAAGCCATTTCACTCTCTTTCTCCACAAGGAAGCTACCATTCTTGCATCTCAGGATGAATCAGAGTGGCCCTCACTTCCTGTGTTACCATCATACGGCAGAGGAAGGGATGCTCCTGATGGAAGATTTAGTAGTCTTATTTTTGGAACTAACCTCACTGATGTTGTAATAACTGGTTTCAATGGGACAATTAATGGACAAGGATCTTATTGGTGGAACAAGTTTCACAAGGGTGAGTTGAAACTCACCAGGCCTTATATGATAGAGATTATGTTTTCTCATAACATTCAGATGTCAAATCTTACTTTGATCAATTCTCCATCTTGGTTTGTCCATCCAATTTACAGCAGTGACATTATAATTCAAGGGCTGACCATTCTTGCTCCAGTTGACTCTCCCAACACTGATGGAATAAATCCAGATTCTTGTACAAACGCTAGAATTGAAGATTGCTATATTGTCTCTGGTGATGATTGCATTGCAGTAAAGAGTGGTTGGGATGAGTATGGAATTAAATTTGGAATGCCAAGCCAACACATAATAATTAGAAGGCTTGAATGTGTATCACCTGATAGTGCTATGATTGCTTTAGGTAGTGAAATGTCTGGTGGAATCAAAGATGTTAGAGCTGAAGACCTCACAGCCATCAATACTCAATCAGCAGTTAGAATAAAAACTGCAGTTGGTAGAGGAGCATATGTGAGAGACATATTTGTTAAAGGAATGAACTTAAACACCATGAAATATGTCTTTTGGATGACAGGTTCTTATGGCTCACACCCTGACCCTAACTTTAATCCCAAAGCACTTCCCAATATTACTGGAATAAACTATAGAGACGTCTATGCAGATAATGTCACATATTCAGCAAAACTTGAAGGAATTGCTAATGATCCTTTTACAGGAATCTGTATTTCTAATGTGACTATTCATAGTGGGGAAAAGAAATTGCAATGGAATTGCACTGATGTTAAGGGAGTTACAAGCAATGTCTATCCTAAACCTTGTGAATTGCTGCCACTGAAGAAAGAGAAAATTGACTGTCCTTATCCAGATAACAAATTGCCCATTGATGATGTTCAGCTGAAGACTTGTTCCTTTTAAGAGTGTCTCATAATTCTAGAGAATGAATGTGTGCTAATTTTGAATAATGT 1561 0.3882 MIEIMFSHNIQMSNLTLINSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGINPDSCTNARIEDCYIVSGDDCIAVKSGWDEYGIKFGMPSQHIIIRRLECVSPDSAMIALGSEMSGGIKDVRAEDLTAINTQSAVRIKTAVGRGAYVRDIFVKGMNLNTMKYVFWMTGSYGSHPDPNFNPKALPNITGINYRDVYADNVTYSAKLEGIANDPFTGICISNVTIHSGEKKLQWNCTDVKGVTSNVYPKPCELLPLKKEKIDCPYPDNKLPIDDVQLKTCSF 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01130 281 Pfam Glycosyl hydrolases family 28 2 239 IPR000743 GO:0004650|GO:0005975
Pste9g01130 281 Gene3D - 1 248 IPR012334 -
Pste9g01130 281 PANTHER PECTIN LYASE-RELATED 1 273 - -
Pste9g01130 281 SUPERFAMILY Pectin lyase-like 2 278 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01130 Pste-Chr9 8544416 8547258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01130 1 281 Glycoside Hydrolase AT3G61490 67.010 3.06e-145 415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01130 9 8544416 8547258 Pste4g02844 4 19966019 19969850 PCT