Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02844 TTCCACTGTTGTGTGCAGGTCATTGGTGTGGTGTCCTTAGTTCTTGTATTGGGATCAGTAAATGTGAATGTGAAGGTAGTAGGAAGCAGGGTAGGCAACGAATTGAACTCCATTCAATACCCTGCCATCAGTTGTCGAAAGCATAGTGCAGTTTTGACAGATTTTGGTGGAGTTGGTGATGGCAAAACATCCAACACAAAGGCCTTTCGATCTGCTATAAGCTCACTAAGCAAATATGCATCTGATGGGGGTGCACAGCTTATTGTGCCACCAGGAAAATGGCTAACTGGACCCTTTAACCTCACAAGCCATTTCACTCTTTTTCTCCAACAGGATGCTGTTATCCTTGCATCTCAGGATGAATCAGAATGGCCCAATCTCCCTCCATTACCTTCTTATGGAAGAGGAAGAGATGCTCCTAATGGAAGATTTGGCAGTCTAATTTCTGGAACTCATCTCACTGATGTTGTAATTACTGGTAAAAATGGTACAATAGATGGGCAAGGATCTTATTGGTGGAACAAGTTTCATAAAGGACAATTAAAGCTTACCAGGCCATACTTGATTGAGATCATGTACTCTGATCAAATCCAAATATCATATCTCACTTTGCTCAACTCCCCAACCTGGTTTGTCCATCCAATTTATAGCAGTAACATAATAATACAAGGACTTAACATTATTGCACCGGTGGACTCTCCCAACACAGATGGGATAAACCCAGATTCATGTTCAAACATTAGGATTCAAGACTGCTACATTGTTTCTGGTGATGATTGCATTGCAGTAAAAAGTGGTTGGGATGAGTATGGAATTAGATTTGGAAGACCAACCCAACACCTCATCATTAGAAAGGTTACTTGTGTATCCCCTGATAGTGCCATGGTTGCTTTAGGGAGTGAAATGTCTGGAGGAATCGAAGATGTTAGAGTTGAAGATCTCACTGCCATCAACACTCAATCAGCAATTAGAATCAAAACAGCAATTGGTAGAGGTGGATATGTGAAAAATATATTTGTAAGAAGATTGATCTTGAAAACCATGAAATACGTTTTTTGGATTACTGGCACTTATGGATCACATCCTGACCCTGGCTATGATCCTAAAGCACTACCTGTCGTTACTGGGATAAATTATAGGGACATTGTTGCAACGAATGTCACATATTCTGCAAGACTAGAAGGAATTTCCAATGACCCTTTTACGGAAATATGCATTTCTAATACGAGTATCCAAGTGAGTGAACAACGGAAGAAGCTTCAATGGAATTGCACTAATGTTGCTGGAATTACCAGCAATGTCACTCCTGACCCATGTGAATTGCTGCCAAACAAAGGGCAATTC 1344 0.407 FHCCVQVIGVVSLVLVLGSVNVNVKVVGSRVGNELNSIQYPAISCRKHSAVLTDFGGVGDGKTSNTKAFRSAISSLSKYASDGGAQLIVPPGKWLTGPFNLTSHFTLFLQQDAVILASQDESEWPNLPPLPSYGRGRDAPNGRFGSLISGTHLTDVVITGKNGTIDGQGSYWWNKFHKGQLKLTRPYLIEIMYSDQIQISYLTLLNSPTWFVHPIYSSNIIIQGLNIIAPVDSPNTDGINPDSCSNIRIQDCYIVSGDDCIAVKSGWDEYGIRFGRPTQHLIIRKVTCVSPDSAMVALGSEMSGGIEDVRVEDLTAINTQSAIRIKTAIGRGGYVKNIFVRRLILKTMKYVFWITGTYGSHPDPGYDPKALPVVTGINYRDIVATNVTYSARLEGISNDPFTEICISNTSIQVSEQRKKLQWNCTNVAGITSNVTPDPCELLPNKGQF 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02844 448 Pfam Glycosyl hydrolases family 28 144 428 IPR000743 GO:0004650|GO:0005975
Pste4g02844 448 SMART pbh1 217 243 IPR006626 -
Pste4g02844 448 SMART pbh1 244 265 IPR006626 -
Pste4g02844 448 SMART pbh1 306 327 IPR006626 -
Pste4g02844 448 SUPERFAMILY Pectin lyase-like 43 441 IPR011050 -
Pste4g02844 448 PANTHER PECTIN LYASE-RELATED 26 445 - -
Pste4g02844 448 Gene3D - 30 436 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02844 Pste-Chr4 19966019 19969850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02844 36 445 Glycoside Hydrolase AT3G48950 70.073 0.0 634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02844 4 19966019 19969850 Pste4g02844 4 19966019 19969850 ECH
Pste9g01130 9 8544416 8547258 Pste4g02844 4 19966019 19969850 PCT