Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01000 AACAACTACTACACATTGCACAAACACATATACATAAACGTACACAGCAACACTCTCCCACATTGTCTCTCTTTGTCTCTTACTCTGTTATCTCTTCTCCGTTGAATTTCCAACCCGTGCTAGATTCTCTTTTCCTTTTTCCCGTCTTTCTTTCTTCCATACTCACATTTCTTGTCACTTTATTTAACCCTTTTGTAATGTGTTTGCTTATAATGCTGCAAGCTTGTGTCTTTCACAGCTGAAAAAGAGTGGTAGTAATAGTGGTTGCAGCCTGGCATCCCATCTGTTACAAAACTAGGATGCTCAAGAAAGGAATCATTTTGTGAACTATACACTCCAAAGGAAACAGCTTTATTTGATTTCGTTCTTAGTTTAAAAACCCTTTGGATTTTGTCTTGTGAGCATGGGAGAATCAAAGAAGGGGGGTTTGTGAAGTGGGGAGTTTCAGATTTGAAGATTGAGGTGTTGAGTGAGGTAAGGGTTCAATGGACACCAAAGGGAGACTAGTTGCAGGGTCTCATAACAGGAATGAGTTTGTACTAATCAATGCTGATGAGACTGCTAGAGTGACCGCTGTCACAGAATTAAGTGGCCAAATTTGTCAGATCTGTGGGGATGAGTTGGAGGTTACAGTGAACGGGGAGCCATTTGTTGCTTGCAATGAATGTGCATTCCCTGTGTGCAGACCTTGCTATGGGTATGAAAGAAGAGAGGGTAACCAAGTCTGTCCTCAGTGTAAAACAAGATATAGGCGCATCAAAGGTTGTCCTAGAGTTGAGGGTGATGAAGAAGAGGACGATACTGATGATTTGGAAAGCGAATTTGATATTGGAAGCAATCTTAGGCGAGATCCTCATCACATTGACTATGCTTCACAGGTGAATGGTTCAGTCCACACACCATCAGAATTTGATGTAGCTTCTGTGGCTTCTGAGATCCCTCTCCTGACATATGGGCAAGAGGATGTAGGCATTTCTGCTGATAAACATGCACTTATTCTTCCTCCATTCATGGCTCGAGGGAAACGGATTCATCCTATGCCTTTTCCTGATTCAACTGTACCTGGTATGTAATTTCATTGGACAACACTTTGGTGCAATTATTCAAGTGTTTTTGGCACTGATGTCCAATCAAAAATTGGAATTTTGCGTTGGTATTCATGCCAACCTTTTATTTTGTCTTGGTGTGCATGTGCATTGTTTACACTGTGCTGCTTTTTTCAACCTAGACCTATGGATCCTAAAAAGGATATAGCTGTTTATGGATATGGAAGTGTTGCATGGAAGGAACGGATGGAGGATTGGAAGAAAAAGCAAGGTGAAAAACTTCAGGTGGTTAGGCATGAAGGGGGTAAGGATAATGATGAATGGGATGATCCTGACTTGCCAAAAATGGATGAAGGAAGGCAGCCACTTTGGAGGAAGTTGCCAATTAGTTCAAGCAGGATAAATCCATACAGAATCATAATAGTACTCCGGATTGCCATTCTTGGCCTCTTTTTTCATTATAGAATTCTCCATCCAGTCAATGATGCATATGCATTGTGGCTCACATCAATAATATGTGAAATCTGGTTTGCTGTGTCATGGATTTTTGATCAGTTCCCAAAATGGAGCCCAATTCTGCGAGAAACATACCTTGATCGTTTATCTCTAAGGTATGAGAAAGAAGGAAAGCCATCTCAATTAGCTCCTATAGATGTGTTTGTTAGTACAGTGGATCCTATGAAAGAACCTCCACTAATTACTGCAAACACTGTTTTGTCTATCCTTGCTGTGGATTATCCTGTAGACAAGGTTGCATGCTATGTCTCAGATGATGGTGCTGCAATGCTTACATTTGAAGCACTCTCTGAAACTTCTGAGTTTGCAAGGAAATGGGTTCCATTCTGCAAGAGGTTCAGCATTGAGCCACGGGCTCCAGAATGGTATTTTGCTCAGAAGGTTGACTACTTGAAGGATAAAGTTGATGCAGCATTTATAAGAGAACGTCGTGCCATTAAGAGGGAGTATGAAGAATTCAAAGTGAGGATTAATGCATTGGTGGCAATGGCGCAGAAGGTTCCTGAGGATGGTTGGACAATGCAGGATGGTACTCCATGGCCTGGGAATAATGTCAGAGATCATCCTGGAATGATACAAGTTTTCCTTGGTCAAAATGGTGTACGTGACATTGAAGGAAATGAATTACCTCGTCTTGTCTATGTGTCTCGTGAGAAAAGACCTGGATATGAGCATCACAAAAAAGCTGGAGCTATGAATGCTTTGGTGAGAGTCTCAGCAATAATCACAAATGCTCCTTACCTACTGAATGTTGATTGTGATCACTACATAAATAACAGTAAGGCCCTTCGTGAAGCCATGTGCTTCATGATGGATCCTACATCAGGGAAAAAAATATGCTATGTACAATTTCCTCAAAGATTTGATGGGATTGATCGTCATGATAGATACTCAAATCGCAATGTTGTATTCTTTGATATCAATATGAAAGGTTTGGATGGAATCCAAGGACCGATATATGTGGGAACTGGGTGTGTCTTCAGGAGGCAGGCATTTTATGGATATGATGCCCCTACTTCAAAGAAACCACCAAGGAAGACATGTAACTGTTTGCCTAAATGGTGCTGCTGCCTTTGTTGTTGTGGATCCAGGCCGAAAAAGATTAAAGCAAAGTCAAGTATGAAAAAGAAGATAAAGAATAAGGATGATACTAAGAAAATGCATGCTCTAGAAAATATTGAAGAGGGAATTGAAGGGATTGACAACGAGAAGTCATCGCTAATGTCTCAACAAAAGTTTGAGAAGAAATTTGGGCAATCATCTGTTTTCATAGCTTCAACACTCATGGAAGATGGAGGCCTTCCAAAAGCAGCGAGTTCTGCAACACTCTTGAAGGAAGCCATCCACGTAATTAGTTGTGGTTATGAGGATAAGACAGAATGGGGGAAAGAGGTTGGGTGGATATATGGCTCTGTTACAGAAGATATTTTAACAGGTTTCAAAATGCATTGTCATGGTTGGAGATCTGTGTACTGCATGCCAAAAAGGCCTGCTTTTAAGGGTTCAGCTCCTATAAATCTCTCAGATCGTCTGCATCAAGTTCTTCGGTGGGCGCTTGGATCCGTTGAGATCTTTTTCAGTAGGCATTGTCCTATATGGTATGGTTATGGTGGTGGCTTGAAATCGCTGGAACGCTTCTCTTACATCAACTCAGTGGTTTATCCTCTGACTTCACTTCCGTTAATCGCCTACTGCACTTTGCCAGCTGTCTGTCTGCTCACTGGGAAGTTCATTGTTCCTGAGATAAGTAACTATGCAAGTATCATTTTCATGGCCCTCTTCATCTCTATAGCTGCAACTGGCATCCTGGAAATGCAGTGGGGAGGTGTTGGTATACATGACTGGTGGAGGAATGAGCAGTTCTGGGTTATTGGTGGTGCCTCGTCACATCTGTTTGCTCTCTTTCAGGGTTTGCTCAAAGTTCTAGCAGGAGTTAACACAAATTTCACTGTCACATCCAAAGCAGCAGATGATGGACAGTTTGCTGAACTCTACATCTTCAAGTGGACATCCTTATTGATCCCTCCCTTGACCCTACTGATCATAAACATAATTGGAGTCATTGTTGGCGTCTCAGATGCAATAAACAATGGCTATGATTCATGGGGTCCTTTGTTTGGAAAGCTATTTTTTGCCCTTTGGGTCATTGTCCATCTTTACCCTTTCCTCAAGGGAGTCATGGGAAAACAGGAAGGTGTTCCTACCATAATTTTGGTCTGGGCTATTCTTCTATCTTCCATCTTAACACTACTTTGGGTGAGAATCAACCCATTTTTGGCCAAAAATGATATTGTGTTGGAAATTTGTGGATTGAACTGTGACTAAGTTAACACAAAATGGAAGGCACAGTTTGATGTTTTACACAGATAAGGCCTGCAACATGCATAAAGTTTTGGTGTTAGACACATGAAACTCTCGGGATGCAGTACTATCTGTTGGTGAGAGCTGCCACTGAGAAAAACTGTTAGTTTGTGGCAGGTGTTTGTAGATACAACATGTTTTGAGAGGCTTCATTATTCTTTTTATACATGTGCATTATCTAAATGAGTCTGAAATCACAGGTGAGATGTAATTTATAACTTACTTCTGAATAAGGCATCTCATATTTGTAATCATAAACATTCCCATGTGTTTGAAATCCCCCATAAGAAGTGGGATTTGTGGTTGGTTTGGTACTGTTGCACCAAGTGAATAAAAATGTCTACAGTGTATAGTTTCTCCAGATCCGTAGTATCATGAAAACAATGCA 4311 0.4103 MDTKGRLVAGSHNRNEFVLINADETARVTAVTELSGQICQICGDELEVTVNGEPFVACNECAFPVCRPCYGYERREGNQVCPQCKTRYRRIKGCPRVEGDEEEDDTDDLESEFDIGSNLRRDPHHIDYASQVNGSVHTPSEFDVASVASEIPLLTYGQEDVGISADKHALILPPFMARGKRIHPMPFPDSTVPGM 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01000 195 CDD mRING-HC-C4C4_CesA 37 87 - -
Pste9g01000 195 SUPERFAMILY RING/U-box 27 107 - -
Pste9g01000 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Pste9g01000 195 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Pste9g01000 195 FunFam Cellulose synthase 21 112 - -
Pste9g01000 195 Pfam Zinc-binding RING-finger 31 105 IPR027934 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01000 Pste-Chr9 6480696 6489689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01000 1 192 Glycosyltransferase AT5G64740 64.433 5.07e-69 225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01000 9 6480696 6489689 Pste9g01000 9 6480696 6489689 ECH
Pste9g01000 9 6480696 6489689 Pste4g02581 4 18231384 18237186 PCT