Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02581 CCCCCTTTTCTTTTTACAGCCACACCCATCTGTTTCAAAACTCGGTTTCTCAAGAAAAGAATCACTCACTCTCTTTCATTCATTATACCCAACAAAGGAATTCATTTTCTTCATTAACCTCCTCCTGCGTTTAATTACTATCCAACACCCCACGCCCTTTAAATTTCCCTTTCTCTCTCTCATTGTTTGGTACTATTTTAATATATGGTAATGTGGGGAAGGATGTTCCCTATGAATGTGATGGGTACCTGAGCTGAGGGTGTGTGTTTCAATGTGAAAGCAGTGTTATTTCAACATTCAGGTCGAAGTTGTGCTGACTGCTGAGTGCTGCTTTCCATGGATACCAAGGGGAGACTGATTGCAGGGTCGCATAACAGGAATGAGTTTGTTCTCATCAATGCCGATGAAACTGCAAGAGTGAACGCTGTTACAGAATTGAGTGGGCAAATTTGTCAGATCTGTGAGGATGAGATAGAGGTTACTGTGGATGGTCAACCTTTTGTTGCTTGCAATGAATGTGCATTCCCTGTGTGTAGACCTTGCTATGAGTATGAAAGAAGAGAGGGGAACCAAGTTTGCCCTCAATGCAAAACCAGATACAAACGCATAAAGGGTAGTCCCAGAGTTGAGGGTGATGAGGAAGAGGAGGACATTGATGATTTGGAAAATGAGTTTGACATTGGAAGCAATATTAGGCATGGTCACCTTGCTGAGGCCTTTCTCTCTTCTCACCTCAACATTGGCCGTGGTTCACAAGTTAATGCTCCAGGGATCACCACACCATCAGAGATTGATGCAGTTTCTGTGGCTGCTGATATACCTCTCCTGACATATGAACATGAGGATATTGGGATTTCTGCTGATAAACATGCTCTAATTATTCCCCCGTTCATGTCTCGTGGGAAACGGGTTCATCCTATGCCTTTTCCCGATTCATCTGTGTCAGTTCAACCCAGACCTATGGATCCTAAAAAAGATTTAGCAGTTTATGGATATGGAAGTGTCGCCTGGAAGGAACGAATGGAAGAGTGGAAGAAAAAGCAGAATGAAAAAATCGAGGTGGTCAAGCATGAAGGGGGTAACGATAGTGGGAAAAATGATGATCAGTTTAATGACCCTGATTTGCCAAAAATGGATGAAGGCAGGCAGCCACTGTGGAGGAAATTGCCAATTAGTCCAAGCAAGATTAATCCATATCGAATTGTAATAGTACTCCGAATTGCTGTTCTTGGCCTGTTTTTTCATTATAGAATTCTCCACCCGGTCAGTGACGCATATACATTGTGGTTGACATCAGTAATATGTGAAATCTGGTTTGCTGTGTCATGGATTTTGGATCAGTTTCCTAAATGGTGTCCTATCGAGCGAGAAACATACCTTGATCGTTTGTCGTTGAGGTATGAGAAGGAAGGAAAGCCATCTGAATTAGCAGATATAGACGTTTTTGTTAGTACAGTAGATCCTATGAAAGAACCTCCACTAATAACTGCAAATACAGTACTATCCATCCTTGCTGTAGATTATCCGGTGGAGAAAGTTGCATGTTATGTCTCAGATGATGGTGCAGCTATGCTTACATTTGAAGCCCTTTCAGAGACTTCTGAGTTTGCAAGAAAGTGGGTTCCATTCTGTAAGAAGTTCAACATTGAACTCCGGGCTCCTGAGTGGTACTTTGCTCAGAAGGTTGACTATCTGAAAGACAAAGTGGATGCAACATTCATCAGGGAGCGTCGCGCTATTAAGAGAGAGTATGAAGAGTTCAAAGTGCGTGTCAATGCATTGGTTGCAATGGCACAAAAGGTTCCTGAGGATGGCTGGACAATGCAGGATGGGACTCCATGGCCTGGAAACAGTGTCAGAGACCATCCTGGAATGATTCAGGTTTTCCTTGGTCAAAATGGTGTTCGTGATATTGAAGGAAATGAGTTACCTCGTCTTGTCTATGTGTCACGCGAGAAAAGACCAGGATTTGAACACCACAAAAAAGCTGGTGCTATGAATGCCTTGATACGAGTCTCAGCAGTCATATCAAATGCTCCTTACCTACTTAATGTCGATTGTGATCACTACATAAACAACAGTAAAGCACTTCGTGAAGCCATGTGCTTCATGATGGATCCTACATCAGGGAAAAAAATATGCTATGTACAATTTCCTCAAAGATTTGATGGGATTGATCGTCATGATAGATACTCAAATCGCAATGTTGTATTCTTTGATATAAACATGAAAGGTTTAGATGGAATCCAAGGGCCAATATATGTGGGAACTGGGTGTGTCTTCAGGAGGCAGGCACTCTACGGATATGATGCTCCTGCTACGAAGAAACCACCAAGGAAGACCTGTAACTGTTGGCCCAAATGGTGCTGTCTGTGTTGTGGGTCTAGGAACAAGAATAGGAAAGTGAAGTCAAGTCCAAAAAAGAAAATAAAAAGCAAGGATGCTACAAAGCAAATTTATGCACTGGAAAATATTGAAGAGGGAATTGAAGGAATCGATAGTGAGAAGTCATGGTTAATGTCACAACTAAAATTTGAGAAAAAATTTGGACAATCATCTGTTTTCATAGCTTCAACACTCATGGAAGATGGGGGTATTCCAAAAGGAGCAACTTCTGCATCACTCTTGAAAGAAGCCATCCATGTTATCAGTTGTGGTTATGAAGATAAGACAGAGTGGGGGAAAGAGGTTGGATGGATATATGGTTCTGTTACAGAAGATATCTTAACAGGTTTCAAGATGCACTGTCATGGTTGGCGATCTGTGTACTGCATGCCTAAAAGGCCTGCTTTTAAGGGTTCTGCTCCCATAAATCTTTCGGATCGTCTGCATCAAGTTCTCCGTTGGGCACTTGGATCTGTTGAGATCCTGTTGAGCAAACATTGTCCTATATGGTATGGATATGGTTGTGGCTTGAAATGGCTGGAGCGCTTTTCTTACATAAACTCAGTCGTTTATCCTTTGACCTCACTTCCCTTAATTGCCTACTGCACCTTGCCGGCTGTATGTCTTCTCACCGGAAAGTTCATAGTCCCTGAGATTAGCAACTATGCCAGTATAATTTTCATGGCACTCTTCATCTCTATAGCTGCAACAAGCATCCTGGAAATGCAGTGGGGAGGAGTTGGCATACATGACTGGTGGAGGAATGAGCAGTTCTGGGTCATTGGTGGTGCCTCCTCACACCTGTATGCTCTCTTTCAGGGTTTGCTCAAGATTCTGGCAGGAGTTGACACAAACTTCACAGTCACATCCAAAGCTGCAGATGATGGAGACTTTGCTGAACTGTACCTCTTCAAGTGGACATCATTGTTGATCCCGCCTTTAACATTGCTCATCATAAACATAATTGGACTTATTGTAGGTGTTTCAGATGCAATAAACAATGGGTATGATTCATGGGGTCCTCTATTTGGTAAGCTATTTTTTGCTCTTTGGGTCATTGTCCATCTTTACCCTTTCCTCAAGGGAGTCATGGGAAAACAGGAAGGTGTTCCCACCATCATTTTGGTCTGGGCTATTCTTCTGGCTTCAATCTTCTCGCTTCTTTGGGTGAGGATCAACCCATTTGTGTCAAAAGATGACATTGTCTTGGAGCTTTGTGGGTTGAATTGTGAC 3618 0.4256 MDTKGRLIAGSHNRNEFVLINADETARVNAVTELSGQICQICEDEIEVTVDGQPFVACNECAFPVCRPCYEYERREGNQVCPQCKTRYKRIKGSPRVEGDEEEEDIDDLENEFDIGSNIRHGHLAEAFLSSHLNIGRGSQVNAPGITTPSEIDAVSVAADIPLLTYEHEDIGISADKHALIIPPFMSRGKRVHPMPFPDSSVSVQPRPMDPKKDLAVYGYGSVAWKERMEEWKKKQNEKIEVVKHEGGNDSGKNDDQFNDPDLPKMDEGRQPLWRKLPISPSKINPYRIVIVLRIAVLGLFFHYRILHPVSDAYTLWLTSVICEIWFAVSWILDQFPKWCPIERETYLDRLSLRYEKEGKPSELADIDVFVSTVDPMKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFNIELRAPEWYFAQKVDYLKDKVDATFIRERRAIKREYEEFKVRVNALVAMAQKVPEDGWTMQDGTPWPGNSVRDHPGMIQVFLGQNGVRDIEGNELPRLVYVSREKRPGFEHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPATKKPPRKTCNCWPKWCCLCCGSRNKNRKVKSSPKKKIKSKDATKQIYALENIEEGIEGIDSEKSWLMSQLKFEKKFGQSSVFIASTLMEDGGIPKGATSASLLKEAIHVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSKHCPIWYGYGCGLKWLERFSYINSVVYPLTSLPLIAYCTLPAVCLLTGKFIVPEISNYASIIFMALFISIAATSILEMQWGGVGIHDWWRNEQFWVIGGASSHLYALFQGLLKILAGVDTNFTVTSKAADDGDFAELYLFKWTSLLIPPLTLLIINIIGLIVGVSDAINNGYDSWGPLFGKLFFALWVIVHLYPFLKGVMGKQEGVPTIILVWAILLASIFSLLWVRINPFVSKDDIVLELCGLNCD 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02581 1094 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Pste4g02581 1094 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Pste4g02581 1094 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 513 663 IPR029044 -
Pste4g02581 1094 FunFam Cellulose synthase 484 658 - -
Pste4g02581 1094 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 271 1059 - -
Pste4g02581 1094 MobiDBLite consensus disorder prediction 244 269 - -
Pste4g02581 1094 SUPERFAMILY Nucleotide-diphospho-sugar transferases 380 892 IPR029044 -
Pste4g02581 1094 CDD mRING-HC-C4C4_CesA 37 87 - -
Pste4g02581 1094 Pfam Zinc-binding RING-finger 31 105 IPR027934 -
Pste4g02581 1094 SUPERFAMILY RING/U-box 27 107 - -
Pste4g02581 1094 FunFam Cellulose synthase 21 112 - -
Pste4g02581 1094 Pfam Cellulose synthase 367 1083 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02581 Pste-Chr4 18231384 18237186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02581 1 1093 Glycosyltransferase AT5G64740 78.233 0.0 1761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01000 9 6480696 6489689 Pste4g02581 4 18231384 18237186 PCT