Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02030 GTCTTGAAATGAGCTCTCAGAAGCTTATAATGGTTGGTGATGGTGGAAATAGTGGGAAAGGAGTGAACTTGACCGTTGGGGTGATCACTGAATGGAAGGATATTCCAATCGAGCTTTTGATGCAAATTTTGAAACTTGTGGATGACAAAACGATTATCATAGCTTCTCAAGTTTGTCGTGGGTGGAGAGAGGCAATTTGCTTTGATCTCACTCAGTGCATCAAGAACGTGAATAGCTTGGTCCTATCCCTTGCTCCTAAATTCACAAAATTAAAGACCTTAATCCTTTCCCAAAACAAGCATCAACTAGAGGACAATGCTGTTGTGACTATTGCAAGAAACTGTCGTGAACTCCAAAGCCTGGACCTCAGAGAAAATTCCAAGCTTACCGATCATTCATTGTTTGCCATAGCCCTTGGTTGTAGTGATCTTAGAAAATTGGACATAAGTGGTTGTTCAGCGTTTAGTGACGATGGTCTGACTTACCTGGTCAGTTTATGTAGAAAGCTGTATTTTTTGAATCTCGCTAGATGTGTTAAAGCTGCATCTGATTCTGCTTTACAGGAAGTTGGATATTGCTTGAATCAGCTATGGTATTTGAACCTTACAGGGTGTAAAAATGTCACTGATGTTGGAGTGATTAGTTTAGCACATGGCTGCCGATATCTTACAATGCTTGACTTGAGTGGTTGTGTCCTTATAACAGCCGTGTTTGCTTTAACCTATTCGGATAATTCAAATTTTGCCTTTGCAACAATGTGTGATTGCCTTGGCAAACAGATGTCGTTGTCTAAGGACCATTGGACTGAGATACTGCCAAAACATCACAGTTCACACAAAGAAATGGCGCTTAACTCGCGATTGACAAAGTTCAAACAAATGGAAGTTGAAGGCCCCTACACGAAGTGTTTTGGAGTAAAAGGTGGGACCCACATTGTTGTCACATCAGATATACACGTGGCATCATACGCGTCGCTATCATGCGCCGTACCGTTCTCTCGCTCACTTCTAAGAAAGCGAAGAAGACCCATTATTCTAGTTGAGAGTGGAGTCATAAAGAATCAAACTTTGTGTTCTCTTCTTCTACGTGCTGAATATCTGGCTTTGGTGGACATGTTTGGCAAGGAGGGTGTAAGAACTGAGGTCTTGAACATGAGCTTTGAGAAGCTTATGATGGTTGGTGATGGTGGAAATAGTGGGAAAGCATTGAACTTGAAAGCTGGGGTGATCAGTGAATGGAAGGATATTCCTGTGGAGCTTTTGATGCAAATTTTGTCACTTGTGGATGACAAAACGGTGATCACAGCTTTTGAAGTTTGTCGTGGTTGGAGAGAAGCAATTTGCTCTGGTCTCACTCGGTGCAGCAAGAACATGAATAGCTTGGTCCTATCCCTTGCTCCTAAATTCACAAAATTGCAGACCTTAATCCTTCGCCAAGACACGCCTCAACTAGAGGACAATGCTGTTGAGACTATTGCAAATTTCTGTCATGAACTCCAAATCCTGGACCTCAGCAAAAGCTTCAAGCTTACAGATCGTTCATTGTGTGCCATAGCCCTTGGTTGTAGGGATCTTACAAAATTGAACATCAGTGGTTGTTCAGCCTTTAGTGACAATGCTCTGGCTTACCTGGCCAGTTTATGCAGAAAGCTGAAAATTTTGAATCTCTGTGGATGTGTTAAAGCCGCATCTGATACTGCTTTACAGGCAGTTGGCCATTACTGCAATCAGTTACAGTTTTTGAACCTTGGATGGTGTGAAAATGTCAGTGATGTTGGAGTGATGAGTTTAGCACATGGCTGCCCTGATCTTAGAACGCTTGATTTGTGTGGTTGTGTCCTTATAACAGATGACAGTGTAATTGCCTTGGCAAACAGATGCCCTCATCTGAGGTCCCTTGGGCTGTACTACTGCCAAAACATCACAGACAAGGCAATGTACTCTTTGGCACAAAGCAAAGTGAACAACAGGATGTGGAGTTCTGTGAAAACTGAAAATGATGAACATGGACTAAGGACTTTGAACATTAGCCAATGCACAGCACTCACACCTTCTGCAGTGCAGGCAGTGTGTGACTCATTCCCTGCACTCCACACCTGCTCAGGAAGACATTCACTCATCATGAGTGGTTGTCTGAATCTGACATCTGTGCACTGTGCATGTGCTGTAACAGCACACCGTGCTGCTATCAGCACCATCCCTCATACTGCTCATTGAGTCTCTGTGGTTGATGTATAAAGAAAACACTTTGAGGAAGTGCCCTTTAAGGGTTTTAGAGTTTGAGTCTTAGGCCTTGTAGATAAGTTTATGACTTTATATGTTGAATACTACTTGTAGAACAGGTTGAACTTTTCATGCTTCAGTTTCTTGTGGTCTCCGAATTTCATGTGAAAGGTTAGGGTAATTACTTAATTAGGGTGTAAAGATGGGGTTTACTCCTAGCTTAGCTATGAATTTATGGTGAGACTCCGACTTCTATAATGGTTGGTTTTATGCTTTATATGTGTTTTTCTTG 2514 0.4216 MSSQKLIMVGDGGNSGKGVNLTVGVITEWKDIPIELLMQILKLVDDKTIIIASQVCRGWREAICFDLTQCIKNVNSLVLSLAPKFTKLKTLILSQNKHQLEDNAVVTIARNCRELQSLDLRENSKLTDHSLFAIALGCSDLRKLDISGCSAFSDDGLTYLVSLCRKLYFLNLARCVKAASDSALQEVGYCLNQLWYLNLTGCKNVTDVGVISLAHGCRYLTMLDLSGCVLITAVFALTYSDNSNFAFATMCDCLGKQMSLSKDHWTEILPKHHSSHKEMALNSRLTKFKQMEVEGPYTKCFGVKGGTHIVVTSDIHVASYASLSCAVPFSRSLLRKRRRPIILVESGVIKNQTLCSLLLRAEYLALVDMFGKEGVRTEVLNMSFEKLMMVGDGGNSGKALNLKAGVISEWKDIPVELLMQILSLVDDKTVITAFEVCRGWREAICSGLTRCSKNMNSLVLSLAPKFTKLQTLILRQDTPQLEDNAVETIANFCHELQILDLSKSFKLTDRSLCAIALGCRDLTKLNISGCSAFSDNALAYLASLCRKLKILNLCGCVKAASDTALQAVGHYCNQLQFLNLGWCENVSDVGVMSLAHGCPDLRTLDLCGCVLITDDSVIALANRCPHLRSLGLYYCQNITDKAMYSLAQSKVNNRMWSSVKTENDEHGLRTLNISQCTALTPSAVQAVCDSFPALHTCSGRHSLIMSGCLNLTSVHCACAVTAHRAAISTIPHTAH 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02030 735 SUPERFAMILY F-box domain 28 64 IPR036047 GO:0005515
Pste8g02030 735 Pfam F-box domain 29 64 IPR001810 GO:0005515
Pste8g02030 735 SUPERFAMILY RNI-like 426 714 - -
Pste8g02030 735 PANTHER UNCHARACTERIZED 64 233 - -
Pste8g02030 735 Gene3D Ribonuclease Inhibitor 25 286 IPR032675 -
Pste8g02030 735 Gene3D Ribonuclease Inhibitor 406 665 IPR032675 -
Pste8g02030 735 Pfam F-box-like 411 445 IPR001810 GO:0005515
Pste8g02030 735 SMART fbox_2 413 452 IPR001810 GO:0005515
Pste8g02030 735 SMART fbox_2 32 71 IPR001810 GO:0005515
Pste8g02030 735 Pfam Leucine Rich repeat 138 160 IPR001611 GO:0005515
Pste8g02030 735 Pfam Leucine Rich repeat 598 621 IPR001611 GO:0005515
Pste8g02030 735 Pfam Leucine Rich repeat 196 214 IPR001611 GO:0005515
Pste8g02030 735 Pfam Leucine Rich repeat 624 647 IPR001611 GO:0005515
Pste8g02030 735 Pfam Leucine Rich repeat 572 595 IPR001611 GO:0005515
Pste8g02030 735 ProSiteProfiles F-box domain profile. 26 63 IPR001810 GO:0005515
Pste8g02030 735 SUPERFAMILY RNI-like 63 232 - -
Pste8g02030 735 SMART LRR_CC_2 545 571 IPR006553 -
Pste8g02030 735 SMART LRR_CC_2 466 492 IPR006553 -
Pste8g02030 735 SMART LRR_CC_2 191 216 IPR006553 -
Pste8g02030 735 SMART LRR_CC_2 624 649 IPR006553 -
Pste8g02030 735 SMART LRR_CC_2 598 623 IPR006553 -
Pste8g02030 735 SMART LRR_CC_2 519 544 IPR006553 -
Pste8g02030 735 SMART LRR_CC_2 112 137 IPR006553 -
Pste8g02030 735 SMART LRR_CC_2 572 597 IPR006553 -
Pste8g02030 735 SMART LRR_CC_2 493 518 IPR006553 -
Pste8g02030 735 SMART LRR_CC_2 164 190 IPR006553 -
Pste8g02030 735 SMART LRR_CC_2 217 240 IPR006553 -
Pste8g02030 735 SMART LRR_CC_2 85 111 IPR006553 -
Pste8g02030 735 SMART LRR_CC_2 138 163 IPR006553 -
Pste8g02030 735 SMART LRR_CC_2 665 690 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02030 Pste-Chr8 16466379 16481861 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g02030 8 16466379 16481861 Pste8g02030 8 16466379 16481861 ECH
Pste8g02030 8 16466379 16481861 Pste2g03286 2 32746590 32749658 PCT