Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01843 TGCTTCTCTCTTTTGCCTGTGAGGAAGGAAAAACACAAGGCAAAAGTCAATTGGGGGCATGCAAGGTCTTCAAAAGAGGACTTTAATACTCTACTTTCCAAACTACAATCTACAAAACTATCATCAAATCCAACCACTTTTGGTGTCATTGGTATTAAAAAAAATTCAAGGTTCAATGCAAGGATTAGGAACCTCGATAGTCATGTGATGGCGGAAGCACATGAAGCTTATAAAGGGGAAGATAAGGATGAAGATCCTCTGTTGATAAGGAGGGAACTCTCTAATTTTGATCTCCAAGATGACAATGTTACAAGCAAAGAAAGGTATGAAACAAAAGAAGAAGAGACAGAACATCCCATTTTATATAAAAACCAAGTCAACAATGAATTGGAAGACAAAAAAGATGGATACAACAAAAAGAGTGTTGATACAATTGAAGGTGAACACAACAGTGATCTTGGAATTGGCAAGGTTGAATTATGGGCTTCTCCAAAGTTCAAGATGCATTTCTCTGATCTTGACAAATTTGTTAAGCATGGGCAAATAACTCATCACTTGCTAGCTTCAAAGTCAAAGTATTTTGAGAATTTTCAGGAATTATCACCAATGGTTAATCTTGAGAGCCCCAGGTATGTGATGAGTCACAACAGTGCTGATAGAGTATTGTTGAAAAGGCACTCTTCAAGTCAGGCACTCCCTTTTGGAAGTAAAAAATTATGGTGGAAGATGATCATGTGGAGCCACAGGAACATAAATAGAACTTTCTCTAACAATTCAACACTAATTCCTGCTAGTGCTACTTTAAATAGTGGGTACTCTTCAGACACCCTTGAACCAAAACAAGGCAAGACATTGAGGTCAGTGGAATCTTCTGAAAAAATTATTACAGAGTCTTTTAACAAAAGAAACATTGATAAAAATATTGATAATCAAAGGGGAAGCAGGTTTAAAAGTGACCAACGGATTGCTTTTTTAGCAAAATCATCCTCTTTTTCTAGAGTGGATGCATGGTTGAAAGGTCTTGAAATTCACCAACCACTTCTCGGGGTTGATTTTGATTATGACAATGCCAAAAATATTGCTTTCCCACCTTCTCCTGATACTGGTAGATCAATGATGAGAACCACATCTCAGTTGACTTATCCAAATGCCAATGTTTCAAAAGAGACTTTAACTGCCATTAGTGTAGTCCAGTCTCTAAATCTAGCATCAAATATTGGTATAAACGCCATCCCTGCTATTTGCCACTTATCCAATCTCCGCTCTGTCAACTTGTCAAACAATTTCATAGTTCACATCTTACCAGGATTTCTACCAAAGGGTATTCAAACACTTAACTTGTCAAAAAACAAGATAAACACCATTGATGGCCTTAGAGAATTGAACAAGTTGCGGATACTTGACCTAAGTTACAACCGCATCTCGAGGATTGGACAAGGTTTGTCAAGTTGTACACTTATCAAAGAGCTATATCTTATGGGAAACAAGATAAGTGATGTTGAAGGTCTACACAGGCTATCAAAACTAACAATTCTAGACTTGAGCTTCAACAATATCTCAACCACCAAAGCATTAGGCCAGCTCGTGACTAACTACGACTCACTTAAAGCTCTTAGTTTACTTGGAAATCCGATTCAAAGAAACATCAGCAATTACCAACTAAACAAGGTAGTCTATGGTCTTCTTCCAAAGCTGGTGTACCTGAACAAGCAGCCCCTCAAGACTCATAGGACACGTGAAATATTAAGTGATAGTATTGTCAGAGCTGCCCTTGGAAACAACACAAGGAGCAATGACAAAAGATCAATAAGGAGAGTTGGCCATGGAGGATCAAGTGTTTCCAAACGGTATAGAAGAAGTGCCAATGGTTCCCAAAAAAGCACAAATCGAACAAGAAAG 1899 0.3791 CFSLLPVRKEKHKAKVNWGHARSSKEDFNTLLSKLQSTKLSSNPTTFGVIGIKKNSRFNARIRNLDSHVMAEAHEAYKGEDKDEDPLLIRRELSNFDLQDDNVTSKERYETKEEETEHPILYKNQVNNELEDKKDGYNKKSVDTIEGEHNSDLGIGKVELWASPKFKMHFSDLDKFVKHGQITHHLLASKSKYFENFQELSPMVNLESPRYVMSHNSADRVLLKRHSSSQALPFGSKKLWWKMIMWSHRNINRTFSNNSTLIPASATLNSGYSSDTLEPKQGKTLRSVESSEKIITESFNKRNIDKNIDNQRGSRFKSDQRIAFLAKSSSFSRVDAWLKGLEIHQPLLGVDFDYDNAKNIAFPPSPDTGRSMMRTTSQLTYPNANVSKETLTAISVVQSLNLASNIGINAIPAICHLSNLRSVNLSNNFIVHILPGFLPKGIQTLNLSKNKINTIDGLRELNKLRILDLSYNRISRIGQGLSSCTLIKELYLMGNKISDVEGLHRLSKLTILDLSFNNISTTKALGQLVTNYDSLKALSLLGNPIQRNISNYQLNKVVYGLLPKLVYLNKQPLKTHRTREILSDSIVRAALGNNTRSNDKRSIRRVGHGGSSVSKRYRRSANGSQKSTNRTRK 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01843 633 MobiDBLite consensus disorder prediction 615 633 - -
Pste8g01843 633 SMART LRR_sd22_2 461 483 - -
Pste8g01843 633 SMART LRR_sd22_2 484 505 - -
Pste8g01843 633 SMART LRR_sd22_2 506 527 - -
Pste8g01843 633 SMART LRR_sd22_2 439 460 - -
Pste8g01843 633 FunFam Protein phosphatase 1 regulatory subunit pprA 377 559 - -
Pste8g01843 633 ProSiteProfiles Leucine-rich repeat profile. 441 462 IPR001611 GO:0005515
Pste8g01843 633 Gene3D Ribonuclease Inhibitor 481 578 IPR032675 -
Pste8g01843 633 SUPERFAMILY L domain-like 388 558 - -
Pste8g01843 633 ProSiteProfiles Leucine-rich repeat profile. 508 529 IPR001611 GO:0005515
Pste8g01843 633 Pfam Leucine Rich repeat 507 520 IPR001611 GO:0005515
Pste8g01843 633 PANTHER NISCHARIN RELATED 192 628 - -
Pste8g01843 633 Gene3D Ribonuclease Inhibitor 368 479 IPR032675 -
Pste8g01843 633 ProSiteProfiles Leucine-rich repeat profile. 486 507 IPR001611 GO:0005515
Pste8g01843 633 Pfam Leucine rich repeat 418 474 IPR001611 GO:0005515
Pste8g01843 633 ProSiteProfiles Leucine-rich repeat profile. 463 485 IPR001611 GO:0005515
Pste8g01843 633 MobiDBLite consensus disorder prediction 597 633 - -
Pste8g01843 633 SMART LRR_typ_2 461 484 IPR003591 -
Pste8g01843 633 SMART LRR_typ_2 417 439 IPR003591 -
Pste8g01843 633 SMART LRR_typ_2 506 528 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01843 Pste-Chr8 13140581 13142760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01843 441 550 Receptor kinase-like Gene Family AT4G39400 35.043 2.77e-06 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01843 8 13140581 13142760 Pste8g01843 8 13140581 13142760 ECH
Pste8g01843 8 13140581 13142760 Pste2g02710 2 27355329 27360400 PCT