Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02710 GCCATGGTCACAGACTCGTAGTGTGACCTTAAACACCGATAGATTATGAACAAACCGTGTTCATTGCGCGTTTCTCTTTCTTACATTGTTTTTTAAGAACAAATTCTACTATCATTTAATAATAATATATCACTCTCTCTCTCCACCCTCCAACAAATATACAACACTGTTATGTTCCTTTAGAGAATTACCAGCACAACCATAATAGTTATAGATCTCTGGCCAGAATTCACAAGCTTCGCTTTTTGACCACAAATGTTCTCTCTTTATGTGCGTGGGACAGTGTCTGTGTTACAATCACGAGGCGTTTTCATTTTGGTCAGGTCTATTTCCAGAGGCAAATATTCGTGTAGCTTTGAGGAGCTGCATCATATACTACAACTCTGGCCAACTCTTTAGTCATATTTTCACCAACTGCAGCAGCTCTTGGTCCTTCTTTTGCTTGTTCGCAGTTTTGCTTGGACAGGCTCAAATCTCTTGGTCTTCAATAAGGGTCCTGAAAGCTCAACCAGATGAACTACAGCACCCAAAGATCTCACCAGAGAGTCGTGATTTGAACCCAGCCACTCTAGATGTTACAGTACCCTGTGGTGTGCAGAAGAATTCAAGGAGCAATGTGAGGGTTATGAGTCTTGAGAGTCCCGTGAAGACCGAAGTCGAGGAAGCTTATGAAGGGGAGGATGAGCATGAAGAGTCTCCCTCCATCAAGAGGAACCCGTATGATTTTGATCTTCAAGTCCACGAAGCTGCTGCAAGCAAAGGAGGATATGATCCATCAAATGACGAGATAAAATGCACAAGTTTATATGAAAACCAAGCTAACATTCAATTGGAAGACAAATACGCTGAATACAGCAACAAGAGTGGTGATATAATTCAAAGTGGACATGTCAGTGATCCAGGGATATGCAAGGCTGATTTTTGTGTTTCTCCAAAACTCAAGAGGTCCTGTTCAGACTTGGAAAGAAGGGATGTACTTAGAAACACTTCTCATCTCTTTCCATCTTCTCAGTCACAATCTTTTGAGGATTTGCAGAAATTATCAGCAAATCAGATGGTTAATCTTGAGAGCCCCAGGTCTGCAATGACTCACTGCAGTGCTGATAGAGTGATGTTGAAAAGGCATTCATCAAGTCAAGTTCTCCCTTCTAGAAGCAAAAGATTGTGGTGGAAGTTGTTCCTCTGGAGCCACAGAAATATACATAGATCTCAGTTAAGCAAATTGACACAAATCAATCCTGCAGTTGCTGCTGTAAATAGTCAATGTGGGTACTCCTCAGATACCCTTGAACCAAGACCAGGCAAGGCGTTGGGACATGTGGAATCACCCTCACCAAGTTCATCTTTTGGAGAATACTTTTACAAAAGCTGTGATGACAAAAATATTGACAACCAAAGGTGGAGCAAATTTCAAAAAGAAAATTTTGGTTTTTGGCCACAAAATCAATGGATGGCTTTCTGCACAGAATCATCCTCCTTTAGCAGAGTGGATGAATGGGTTAAAGATCTCGAAATTCAGCAGTCACCTCCTGAGGATGATTTTGATGTTGATAATATTGGAAGCATTGCCTTGTCACCCCCTGATGCTAGCCCACAATTCATAGCATCCTCAAGCACAGTTCAGTTGGTTCAAGATCCAGATGCCAATTTTTCAAAGGAGATATTGAATGCCAATAGTGTTGTTCAGTCCCTGAACCCAGCCTCAACTGCAGCTCATATATCAGGCCTTGGTATAAAAGCCATCCCCGCTATTTCACACTTCGCCACTCTCCGCTCTGTCAATTTGTCAAGCAATCTCATAGTTCACATCACGCCTGGTTTTCTCCCAAAGGGTCTTCATACCCTGAATCTGTCAAGAAACAAAATCAGCACCATTGAGGGCCTCAGAGAATTAACCCGGCTGCGAGTACTTGACTTAAGTTATAATCGCATCTCAAGAATTGGACAAGGGTTATCAAATTGCACTCTAATCAAAGAGCTATATCTTGCGGGAAACAAGATAAGTGATGTTGAGGGGCTACACAGACTATTGAAGCTAACAGTTCTAGACTTGAGCTTTAACAAGATTGCAACAACAAAAGCATTAGGCCAACTGGTGGCTAACTACAACTCACTTCAGGCCCTGAATCTGCTTGGAAATCCAATTCACAGCAACATCAGTGATGACCAGCTGCGCAAAGCAGTTTGTGGTCTTCTTCCAAAGCTTGTATACCTTAACAAGCAATCTATCAAGCCTCAAAGGGGACGAGAAATACTCACTGATAGTGTTGCAAAAGCTGCACTTGGGAATGGCAGCCGGAACTCCTACAGAAGAACACTAAAGAAAGCTGGTGGCCAGGGAGGGTCAAGTTCCTCTAGTGTGCATAGAAGCAGCGCCAGTGTTTCCCATAAAAGCAGGAACAGATCAAGGAGCAGAACTAAACATCAATAGATGTGTAAAAGGTGCAACTCATCAGTATTTGATAAAGTGGATGAGTATTCACCAAATTGTTTTTACCCAATATTTGCTTCAACCTGTAAGCCACCCTACAGAATAAGGCTTGGTTGTGATGGTTGTTGTGTTTGTTTCAACTGTTAGTTATTATCTTGAGTGTTTGATTATACCATAAAGGAGACTGGTCTAGTCATTGAGAGTCTCTTGGTTTAAGACTTGAAGTAATGCAGTCTTCATGTCTCCAATTTTAATGTGTGGAACTTGATGTCATCATCTGGCTTTCGCAAATTTGAACAACTTTGGCATGCAAAATAGTAAAACAATAATTGACCAGCATTGTTGCTACTGATGTCACTATCATTATCATTCAAACCTTGTGTGAGTAGTGAATACCATGGCAACTAAACAATTCATGGGAGGCACCAAGTTTAGCTCAGAAGTTGTAACTGAATGAAATATACTGCAAGTGCAAGAAAACTCCCCGTAACTGTGAATGTGATATCTATTTGAAGTTGTCGATGCAAAAGAAGAATGCTGAGAACTTGTTCCCAAGCGCACCCCCACCGATCTATATAGTCGTTATAATTGAAAATCCGAATGAAGAGGCACACCTACTATTCTTGACTTCTTGTCAAAGCAATGAATACTATGACCAGCCCATTCAGTGAAACTAAAACATTACTGAAATAATAATTGTCCTAGTTAGAAATCAAATGAAATAGACAAGATAAAAAATTATTCATTGCGTTGTATTAGGTTGAAAATTGAGATTTTTCTGCATTCATAGTTAAATGGCTCTGCACATTTTGTGTTAAATTTGGTTAAAAGGTTTGGTTAATGCTCTAAACACACATGTTAATATTCTATCTTTCCGGATATAGTTGAATTGGAGCAATAAAATATGAAAATTTGTGATTTTTCATCTTGGTAAACTCAATTTGCGGAAGTTTTTCTACAACCTTTTTCATCTTTTGGCAATGCCTCAATCGGTTTGAACATTTTGAAGTTGCTCTCGGAGTCCCTCAGTCATTGTCAATTGTCATCATTAAATAGTGACCAA 3494 0.4015 MCVGQCLCYNHEAFSFWSGLFPEANIRVALRSCIIYYNSGQLFSHIFTNCSSSWSFFCLFAVLLGQAQISWSSIRVLKAQPDELQHPKISPESRDLNPATLDVTVPCGVQKNSRSNVRVMSLESPVKTEVEEAYEGEDEHEESPSIKRNPYDFDLQVHEAAASKGGYDPSNDEIKCTSLYENQANIQLEDKYAEYSNKSGDIIQSGHVSDPGICKADFCVSPKLKRSCSDLERRDVLRNTSHLFPSSQSQSFEDLQKLSANQMVNLESPRSAMTHCSADRVMLKRHSSSQVLPSRSKRLWWKLFLWSHRNIHRSQLSKLTQINPAVAAVNSQCGYSSDTLEPRPGKALGHVESPSPSSSFGEYFYKSCDDKNIDNQRWSKFQKENFGFWPQNQWMAFCTESSSFSRVDEWVKDLEIQQSPPEDDFDVDNIGSIALSPPDASPQFIASSSTVQLVQDPDANFSKEILNANSVVQSLNPASTAAHISGLGIKAIPAISHFATLRSVNLSSNLIVHITPGFLPKGLHTLNLSRNKISTIEGLRELTRLRVLDLSYNRISRIGQGLSNCTLIKELYLAGNKISDVEGLHRLLKLTVLDLSFNKIATTKALGQLVANYNSLQALNLLGNPIHSNISDDQLRKAVCGLLPKLVYLNKQSIKPQRGREILTDSVAKAALGNGSRNSYRRTLKKAGGQGGSSSSSVHRSSASVSHKSRNRSRSRTKHQ 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02710 720 SUPERFAMILY Outer arm dynein light chain 1 490 655 - -
Pste2g02710 720 PANTHER NISCHARIN RELATED 249 710 - -
Pste2g02710 720 MobiDBLite consensus disorder prediction 128 148 - -
Pste2g02710 720 ProSiteProfiles Leucine-rich repeat profile. 567 588 IPR001611 GO:0005515
Pste2g02710 720 SMART LRR_typ_2 542 565 IPR003591 -
Pste2g02710 720 SMART LRR_typ_2 498 520 IPR003591 -
Pste2g02710 720 SMART LRR_typ_2 587 609 IPR003591 -
Pste2g02710 720 MobiDBLite consensus disorder prediction 678 704 - -
Pste2g02710 720 Gene3D Ribonuclease Inhibitor 561 659 IPR032675 -
Pste2g02710 720 FunFam Outer arm dynein light chain 1 protein 447 560 - -
Pste2g02710 720 ProSiteProfiles Leucine-rich repeat profile. 522 543 IPR001611 GO:0005515
Pste2g02710 720 MobiDBLite consensus disorder prediction 705 720 - -
Pste2g02710 720 ProSiteProfiles Leucine-rich repeat profile. 544 566 IPR001611 GO:0005515
Pste2g02710 720 SMART LRR_sd22_2 565 586 - -
Pste2g02710 720 SMART LRR_sd22_2 542 564 - -
Pste2g02710 720 SMART LRR_sd22_2 587 608 - -
Pste2g02710 720 SMART LRR_sd22_2 520 541 - -
Pste2g02710 720 Pfam Leucine Rich repeat 589 600 IPR001611 GO:0005515
Pste2g02710 720 MobiDBLite consensus disorder prediction 678 720 - -
Pste2g02710 720 Pfam Leucine rich repeat 500 555 IPR001611 GO:0005515
Pste2g02710 720 FunFam Outer arm dynein light chain 1 protein 561 659 - -
Pste2g02710 720 Gene3D Ribonuclease Inhibitor 437 560 IPR032675 -
Pste2g02710 720 ProSiteProfiles Leucine-rich repeat profile. 589 610 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02710 Pste-Chr2 27355329 27360400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02710 547 674 Receptor kinase-like Gene Family AT5G07280 35.878 1.69e-06 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02710 2 27355329 27360400 Pste2g02710 2 27355329 27360400 ECH
Pste8g01843 8 13140581 13142760 Pste2g02710 2 27355329 27360400 PCT