Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01675 GAGAATGTTTAGGCTCAAAGTGGATGAACCTCCTGACGAAGTCAAAAATCTTTTTGAAGATTATTCACAGAATGGCATCATGAGCATGGATGACCTGTGCGATTTTTTAGTTCTTTTTCAAGGAGAAGAGGAAGCTGGTGATGCCATCAACAAACTTGCTCATGCCATTTTTGACAGTCTCAAACATCTCAACATATTTCAACGAAGGGGCCTCCATGTTGATGCCTTCTTCCGTTATCTCTTAAGTAGTGACCTTAATGGTCCTCTTACTGAGGTGCAGCATGACATGAGTTTTCCGTTGGCACATTATTTCTTATACACAAGCCACAACTCCTACTTAACTGGAAATCAATTTAGCAGTGCTAGCAAAACATCGGCGATAATAAAGGCATTGAAGAAAGGAGTAAGAGTAATTGAGCTAGATTTATGGCCTAATCCCAGAGGCACAGGTGTGCTAGTACATCATGGAGGGACTCTAACTTCTTCAGTGAAACTCCAAGATTGTCTAAATGCAATTAAGGACTATGCATTTGTTGCCTCACCATATCCAGTTATCATTACTTTTGAAGATCATATAACTCAATCTCTTCAAGCCAAAGTGGCTGAGATGGTCGATGAAATATTTGGAGATATGCTATTTTTCCCTGAATATCCACATCACGTGAGGGAATTCCCTTCTCCAGAACAATTGAAGGGAAAAATTTTGATTTCAACTAAACCACCAGAATCTCTTGAAAGTCAGGGCCAAATGACACGAGAGGAAGAATCACAAAGGCTTGCAGACAACATTGATGGATCTAGAGTCGATTACAAGGATGAGGAGGATGATATTCTTGAATATAGGGATTTGATTTCCATTCATGCATGGAAGCCAAAAGGTAAGTTAAAAAACTTGCTAATTGATCATGATCAAGTTAGGCGTCTTAGCTTGAGTGAACATGAGCTCGAAGACATTGTCAAAGATCATGGAACTGACATTGTCAGATTTACCCAAAGAAACTTGCTTAGAATATATCCTAAGGGTACTCGTCTCGACTCATCTAATTACGATCCCATGATTGGATGGATGCATGGAGCACAAATGGTAGCATTTAATATGCAGGGAGGAGACCACTTTCTTAGATACATGGAAGGAATGTTCAGAGCAAATGGTGGTTGTGGTTATGTTAAAAAACCAGACTTTCTAACGAAAATTGGTCCCAATAATGAGGTGTTGGTATACATGGGTGAGGGATGGCGTTCAGATTTCCGCCCAACACATTTTGATTTGTATTCTCCTCCTGACTTCCAAGTACAGGTTCGTATTCATGGTGTTCCAGCTGATAAAGCTACCAAATACACTAGGACAATTGAAGATGATTGGGTACCAGTGTGGAATGAAGAGTTAAGTTTTCCATTGAGAGTTCCAGAATTAGCCCTGTTGTACATCAAAGTCGTTGAGCGTGACTTTTCTAGAAAACATGATTTTGGAGGACAAACATGTTTACTTGTATCTGAACTAAGACAAGGCATCCGTGCAGTTCGTTTGCGCAACCGCAAGGGTGAACTTTACAAG 1555 0.4013 MFRLKVDEPPDEVKNLFEDYSQNGIMSMDDLCDFLVLFQGEEEAGDAINKLAHAIFDSLKHLNIFQRRGLHVDAFFRYLLSSDLNGPLTEVQHDMSFPLAHYFLYTSHNSYLTGNQFSSASKTSAIIKALKKGVRVIELDLWPNPRGTGVLVHHGGTLTSSVKLQDCLNAIKDYAFVASPYPVIITFEDHITQSLQAKVAEMVDEIFGDMLFFPEYPHHVREFPSPEQLKGKILISTKPPESLESQGQMTREEESQRLADNIDGSRVDYKDEEDDILEYRDLISIHAWKPKGKLKNLLIDHDQVRRLSLSEHELEDIVKDHGTDIVRFTQRNLLRIYPKGTRLDSSNYDPMIGWMHGAQMVAFNMQGGDHFLRYMEGMFRANGGCGYVKKPDFLTKIGPNNEVLVYMGEGWRSDFRPTHFDLYSPPDFQVQVRIHGVPADKATKYTRTIEDDWVPVWNEELSFPLRVPELALLYIKVVERDFSRKHDFGGQTCLLVSELRQGIRAVRLRNRKGELYK 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01675 517 SMART plcy_3 279 395 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pste8g01675 517 Pfam C2 domain 425 502 IPR000008 -
Pste8g01675 517 Gene3D C2 domain 403 517 IPR035892 -
Pste8g01675 517 Gene3D Phosphatidylinositol (PI) phosphodiesterase 90 402 IPR017946 GO:0006629|GO:0008081
Pste8g01675 517 ProSiteProfiles C2 domain profile. 377 510 IPR000008 -
Pste8g01675 517 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 307 393 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pste8g01675 517 SMART plcx_3 93 238 IPR000909 -
Pste8g01675 517 CDD C2_PLC_like 405 516 - -
Pste8g01675 517 Gene3D - 8 86 - -
Pste8g01675 517 SMART C2_3c 400 508 IPR000008 -
Pste8g01675 517 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 308 394 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pste8g01675 517 Pfam Phosphoinositide-specific phospholipase C, efhand-like 11 84 IPR015359 -
Pste8g01675 517 SUPERFAMILY PLC-like phosphodiesterases 93 395 IPR017946 GO:0006629|GO:0008081
Pste8g01675 517 PRINTS Phospholipase C signature 222 239 IPR001192 GO:0035556
Pste8g01675 517 PRINTS Phospholipase C signature 494 504 IPR001192 GO:0035556
Pste8g01675 517 PRINTS Phospholipase C signature 124 144 IPR001192 GO:0035556
Pste8g01675 517 PRINTS Phospholipase C signature 354 372 IPR001192 GO:0035556
Pste8g01675 517 PRINTS Phospholipase C signature 333 354 IPR001192 GO:0035556
Pste8g01675 517 PRINTS Phospholipase C signature 98 116 IPR001192 GO:0035556
Pste8g01675 517 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 403 514 IPR035892 -
Pste8g01675 517 SUPERFAMILY EF-hand 6 85 IPR011992 -
Pste8g01675 517 ProSitePatterns EF-hand calcium-binding domain. 19 31 IPR018247 -
Pste8g01675 517 Pfam Phosphatidylinositol-specific phospholipase C, X domain 95 238 IPR000909 -
Pste8g01675 517 FunFam Phosphoinositide phospholipase C 90 406 - -
Pste8g01675 517 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 93 238 - -
Pste8g01675 517 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 8 515 IPR001192 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01675 Pste-Chr8 10694223 10702778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01675 2 517 EF-hand Containing Proteins AT5G58670 53.704 0.0 537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01675 8 10694223 10702778 Pste8g01675 8 10694223 10702778 ECH
Pste8g01675 8 10694223 10702778 Pste7g02196 7 20281898 20302577 ECH
Pste8g01675 8 10694223 10702778 Pste8g01212 8 6423370 6424554 ECH