Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01212 ATGTTACTTCCTGCAAAATTCCACGAGTTAGGATGTGAGTTCAGTCCACACTTCTTCCCTGATATAGTAGCTTGCTGTTACACACATCATGTCATGAAGTATATTATCGAAATCAATAACGATATATTGTTATATGATTCAACTTTCATTTGTAGTTGGTTTCATGGCCAGGGGTATGGGAGATCTCTTTGGTTGATGCATGGAATGTTCAGATCTAATGGAGGGTGCGGTTATGTTAAGAAACCAGATTTTCTATTAAAAAATGGTTCAAATGATGAGGTCTTCGATCCTAAAGCTAAGCTACCTGTTAAGACTACTTTGAAGGTGACTGTATATATGGGGGAAGGATGGTATTATGATTTCAAGCATACACACTTTGATCAATACTCACCTCCTGACTTCTACACAAGAGTTGGGATTGCTGGAGTCCCTAATGATACTGTAATGAAGAAAACTAAGGCAATAGAGGATAATTGGTTGCCTACATGGAATGAGGTATTCGAGTTCCCTCTCACTGTTCCAGAGTTAGCCTTGCTTCGCATAGAAGTTCATGAGTACGACATGTCTGAGAAAGATGACTTTGGTGGACAAACATGCCTACCTATCTGGGAGCTAAGAAGTGGCATTCGAGCAATTCCTCTGCATAGCCAAAAGGGAGATAAATACAACTCGGTAAAGCTTCTCATGCGCTTTGAGTTTTATTAATTGATTTTGTGCATCATTCTGCTCTACATTATTATGTACAGTCGCTACTATGTTTTAGTAGTAAGAGTTTGTATGTATGTATTTATTAGCTGGATCATTTTGTGGATTTTGTCCTGTTAAATGATGTAAGAAATAAAATGTGTTGTGTATTTTGTTTTCTTGAGGAGACTTGTGTATCTTGTAAGGCTTATTACATAATATAAACTTAAGGAAATTATCCGTGTTTTCTATGAG 939 0.3706 MLLPAKFHELGCEFSPHFFPDIVACCYTHHVMKYIIEINNDILLYDSTFICSWFHGQGYGRSLWLMHGMFRSNGGCGYVKKPDFLLKNGSNDEVFDPKAKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPNDTVMKKTKAIEDNWLPTWNEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPIWELRSGIRAIPLHSQKGDKYNSVKLLMRFEFY 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01212 234 FunFam Phosphoinositide phospholipase C 101 234 - -
Pste8g01212 234 Gene3D Phosphatidylinositol (PI) phosphodiesterase 4 99 IPR017946 GO:0006629|GO:0008081
Pste8g01212 234 Pfam C2 domain 107 207 IPR000008 -
Pste8g01212 234 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 57 85 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pste8g01212 234 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 106 233 IPR035892 -
Pste8g01212 234 CDD C2_PLC_like 104 234 - -
Pste8g01212 234 SUPERFAMILY PLC-like phosphodiesterases 52 97 IPR017946 GO:0006629|GO:0008081
Pste8g01212 234 Gene3D C2 domain 100 234 IPR035892 -
Pste8g01212 234 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 57 233 IPR001192 GO:0035556
Pste8g01212 234 SMART plcy_3 7 86 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pste8g01212 234 SMART C2_3c 106 214 IPR000008 -
Pste8g01212 234 ProSiteProfiles C2 domain profile. 87 216 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01212 Pste-Chr8 6423370 6424554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01212 50 233 Acyl Lipid Metabolism Gene Families AT3G55940 75.000 3.09e-104 311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02196 7 20281898 20302577 Pste8g01212 8 6423370 6424554 ECH
Pste8g01675 8 10694223 10702778 Pste8g01212 8 6423370 6424554 ECH
Pste8g01212 8 6423370 6424554 Pste8g01212 8 6423370 6424554 ECH
Pste7g02196 7 20281898 20302577 Pste8g01212 8 6423370 6424554 PCT