Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01559 ATGGCAGACCCTCAGAAAATTCATCCTGTCCATGATGTTGAGGCACCAAACCAACCTTCTGCACCATTGGTGCCAAGGAACATGTCCAAATCTGATGCAGGTGATCCAGAGAGAGCACTGCAGCAGCAGCAACAACAACAACAAGCTCCACAAGGCACCATTCCTGTGAAGCATTCCAAGCCACCAAAGAAAAGAAGAAGCTGCTGCTGCAGGTTTTTCTGTTGGTTAATAAGCATATTGCTGATTCTGATTGTGGCAATTGCCATCACAGTTGGGATACTATACCTTGTGTTCAGACCAAAGATTCCAAAGTACTCAGTGGATGAACTGAGAGTCACACAGTTTGATCTTGCTGACAACGACAGTTTATCAGTGACATTCAACTTGACAATCACTGCCAGAAACCCAAACAAGAAGATTGGAATATACTACAGAGGTGGCAGCCACATAACTGCTTGGTACATGGACACAAAATTATGTGAAGGTTCTTTGCCAAAATTCTACCAAGGTCATCGCAACATCACAAAACTTAGTATCCCTCTCACAGGGCAAACACAGAATGCTACTGGAATGCAAAGTACCCTTCAGCAGCAGCTGCAAGAAACGGGTAATGTGCCCCTCAATTTGAAGGTGAAGCAGCCTGTGAGGATCAAACTTGGGAAGTTGAAGCTGTTCAGAATCAACTTCAGAGTTAGGTGCAGGATTGTCGTGGACAACCTTAATGCTAATAATTCTATTAGAATTCAGAGCAGTAGTTGTAAATTCAGGTTTAGGCTGTGA 780 0.4372 MADPQKIHPVHDVEAPNQPSAPLVPRNMSKSDAGDPERALQQQQQQQQAPQGTIPVKHSKPPKKRRSCCCRFFCWLISILLILIVAIAITVGILYLVFRPKIPKYSVDELRVTQFDLADNDSLSVTFNLTITARNPNKKIGIYYRGGSHITAWYMDTKLCEGSLPKFYQGHRNITKLSIPLTGQTQNATGMQSTLQQQLQETGNVPLNLKVKQPVRIKLGKLKLFRINFRVRCRIVVDNLNANNSIRIQSSSCKFRFRL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01559 259 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 30 246 - -
Pste8g01559 259 MobiDBLite consensus disorder prediction 36 54 - -
Pste8g01559 259 MobiDBLite consensus disorder prediction 1 64 - -
Pste8g01559 259 Pfam Late embryogenesis abundant protein 130 233 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01559 Pste-Chr8 8893748 8894527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01559 63 250 EF-hand Containing Proteins AT5G21130 31.414 2.11e-31 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01559 8 8893748 8894527 Pste8g01559 8 8893748 8894527 ECH
Pste7g01878 7 17211867 17212598 Pste8g01559 8 8893748 8894527 PCT