Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01878 ATGATGACAGAACATCAAAGGATTCATCCTGTTCATGATGTGGAGGCACCACACAGACCTTTGGTGCCTGGAAACTACGACAAATCTGATAGGGGTCTTCCTAAGCGCACCTTTCCTGTGATGCACTCAAAGCCACCAAAGAAAAGAAGCTGTTGCTGCAGGTTCATGTGTTGGACATTTAGCATATTGCTGATTTTGATAATTGCTATTGCCATTACAATAGGGATCCTATACCTTGTGTTTAGGCCAAAGCTTCCTAAATACTCAGTGGACAATCTGAGAATAAGTCAGTTCAATGCTTCTGACAACAACACCCTGTATGCCTCTTTCAATGTCAGAATTACTGCAAGAAATCCTAATAAGAAGATTGGAATATACTATGAGGGTGGGAGCCACATAAGGGCTTTGTACATGGACACACAATTGTGTGAAGGGTCTTTGCCAAAGTTCTACCAGGGCCACAGAAACACCACAGTGCTTGATCTGCCTCTAACAGGTCAAACAGACGATGCAAGTGGGCTAGTGAATAGGATTCAGGAGCAGCTGCAACAGACAAACAATATTCCCCTCAATCTCAAGGTTAATCAGCCTGTGAGGGTTAAGCTTGGTAAGTTGAAGCTCTTCAAAGTGAAGTTCAGGGTTAGGTGCAGGCTTGTGGTGGATAATATTCTTGGTGCTAGTGATAATATTAGAATTTCGAGCAGTAATTGTAAGTTCAGGCTTAGGCTATGA 732 0.4276 MMTEHQRIHPVHDVEAPHRPLVPGNYDKSDRGLPKRTFPVMHSKPPKKRSCCCRFMCWTFSILLILIIAIAITIGILYLVFRPKLPKYSVDNLRISQFNASDNNTLYASFNVRITARNPNKKIGIYYEGGSHIRALYMDTQLCEGSLPKFYQGHRNTTVLDLPLTGQTDDASGLVNRIQEQLQQTNNIPLNLKVNQPVRVKLGKLKLFKVKFRVRCRLVVDNILGASDNIRISSSNCKFRLRL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01878 243 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 22 228 - -
Pste7g01878 243 Pfam Late embryogenesis abundant protein 113 217 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01878 Pste-Chr7 17211867 17212598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01878 49 243 EF-hand Containing Proteins AT5G21130 26.667 1.31e-28 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01878 7 17211867 17212598 Pste7g01878 7 17211867 17212598 ECH
Pste7g01878 7 17211867 17212598 Pste8g01559 8 8893748 8894527 PCT