LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste8g01322	CAACAACTGTTCAGTGCACAAACACAAACACAAACACAAACCTTTTTCCAAAAAGCCACATTACTCTTCATTCCCTCGTCTTTTCCATCAGCAACCCCAACTCAACGGTCCCTTCATACACGATAATCTATAAAACCCACCTCCCAAGTTCCTTGTGTATTTCAAACTTCTTCATTGTTACTGAAAAAACTGTAACCGTCGCTATGTTGGAGGAGAGTGAGCCATCACTGGGGTAATTTTTAGTTCAAAAAGTAAGGCTTTGCTGTTGTGGGAAAGTTCTGCAAGATGGAGGCTTTACGCAACAAGGGTGAAAATTTACAAAAGAAAAAAGATGAGTTTCCTTCTTCTGCTAGTGATTCAACTCAACAAGCCAAAGAGTGTTCTTCTCCTCCACTTGGTTGGCCTATTCGGAAGGCTGCACTTTCCAAATGCCGCAAATCAGATGAAAAAGAAAATGAACCTGTTTCTCACTTGGAAGATTCAAAATTTACCAGAATCAATTCAAAAATGCCAGGAATTGATGCAATGAAGGAAAGGTTTGCGAAACTACTGCTAGGGGAAGATATGTCAGGATCTGGGAAAGGAGTGTGCAGCGCTTTGGCCATCTCAAATGCTATTACTAATCTGTGTGCCACTGTGTTTGGGCAATTATGGAGACTAGAACCTATACCTTGCGAAAAGAAAGCAATGTGGCGGAGGGAGATGGAATGGCTTCTTAGTGTTAGTGATCACATTGTTGAGTTAATACCTTCTTGGCAAACATTTCCAGATGGAAGTAAGCTTGAGGTAATGACTTGCAGGCCAAGGTCAGATCTTTTTATCAATCTTCCAGCTCTGCGTAAACTTGACAACATGCTTCTTGAAATTTTAGATAGTTGCAAAGATATGGAGTTTTGGTATGTTGACCAGGGAATTGTAGCCCAAGATGCAGATGGATCAGCTTCATTTTGCAAAAGAATTCAACGGCAAGAGGATAAGTGGTGGCTCCCTGTTCCTCGTGTCCCCCCTTCTGGCCTTAGTGAGGACTCAAGAAAGCAGTTGAATCACACAAGAGAATGTGCAAGCCAAATACTAAAAGCTGCCATGGCTATCAACAATGGTGCTTTAGCTGAAATGGAAGTTCCTGAGTCATACTTGGAAACCCTTCCCAAGAATGGAAGAAGTTGCTTGGGGGATTTTATTTACCATTACATCACAGCAGAGAAATTCTCTCCAGAGTGCCTGCTTGATTGCCTAGACCTGTCCTCTGAGCATGTTGCACTTGAGATCGCAAATCGTGTGGAGGCCTCAATATATGTGTGGCGTAAAAGAGCTCACTCTAAACCTCCACCTAATGCTAACCGTTCAACTACCAAGTCCTCCTGGGAAATTGTCAAGGACTTCATGGCCGATGGAGATAAGAGAGAACTGCTAGCAGAAAGATCTGAAAATGTTCTACTTTCATTGAAGCAACGATTCCCGGGGCTAACTCAAACTACCTTGGATACCTGCAAGATCCAGTGCAACAAGGATGTTGGAAAATCCATACTAGAGAGCTATTCGAGAGTTGTGGAGAGCATGGCATTTAACATTGTGGCTCGCATAGACGATTTGCTATATGTGGATGACTTAACCAAACATTCGGATAGATTTCCATTGGTTCCAATGGCAGTGTCTGTCTCAGGCACTCCACACAAAGAAGTTGGCACACCAGGCTTTTCACCTGCACCACCATTAATTAGTCCTGCAAGGGGAGAGAGATCTCCTTTCCTAAACAATAACAACAACAACAACGTCATCAAACCTCAGCGACGTGGCTTTGGGGTGAGAAGAGTACTGTCAAATTATCTTGGGGCAGAATCTAAAGAAACAAAGAGTTTTAGCAATTCAACTGAGGTGAATGGTTCAAACCCAAACATCAATAAAGCAGAACAGCCAGAACGCCAAAAGAAGTCACATGTCATGAGTGGCAAGGCAAAGTGACCGGTGAGGTTGTATAGTAAAGCAGTCATTTCTTTGTGTACTAGAATCTGTTGTTGGTTGAGTTCCAAAAAATTATGTTGTTAGTTGAGAATGAAAGTTTGTAGTTTTTTGAGTTATTATTTAGTCTTTAACTGAATCTGACACGGATCAGTTCAGGACCAATTGTATCAATTAGAAGAGATTGTATTGAGAGCAAGATAAATGATCTAATGTAGTTAGCGGACATGGTTCAGGACCAATTGCGTATTCCTTCAAAATGGTTGATATGGCTATTGATTATTCTTGCATAC	2252	0.417	MEALRNKGENLQKKKDEFPSSASDSTQQAKECSSPPLGWPIRKAALSKCRKSDEKENEPVSHLEDSKFTRINSKMPGIDAMKERFAKLLLGEDMSGSGKGVCSALAISNAITNLCATVFGQLWRLEPIPCEKKAMWRREMEWLLSVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDLFINLPALRKLDNMLLEILDSCKDMEFWYVDQGIVAQDADGSASFCKRIQRQEDKWWLPVPRVPPSGLSEDSRKQLNHTRECASQILKAAMAINNGALAEMEVPESYLETLPKNGRSCLGDFIYHYITAEKFSPECLLDCLDLSSEHVALEIANRVEASIYVWRKRAHSKPPPNANRSTTKSSWEIVKDFMADGDKRELLAERSENVLLSLKQRFPGLTQTTLDTCKIQCNKDVGKSILESYSRVVESMAFNIVARIDDLLYVDDLTKHSDRFPLVPMAVSVSGTPHKEVGTPGFSPAPPLISPARGERSPFLNNNNNNNVIKPQRRGFGVRRVLSNYLGAESKETKSFSNSTEVNGSNPNINKAEQPERQKKSHVMSGKAK	558

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste8g01322	558	MobiDBLite	consensus disorder prediction	519	541	-	-
	Pste8g01322	558	Pfam	PRONE (Plant-specific Rop nucleotide exchanger)	78	444	IPR005512	GO:0005085
	Pste8g01322	558	MobiDBLite	consensus disorder prediction	1	20	-	-
	Pste8g01322	558	FunFam	Rop guanine nucleotide exchange factor 1	69	309	-	-
	Pste8g01322	558	Gene3D	PRONE domain, subdomain 1	303	449	-	-
	Pste8g01322	558	Gene3D	PRONE domain, subdomain 1	70	302	-	-
	Pste8g01322	558	MobiDBLite	consensus disorder prediction	519	558	-	-
	Pste8g01322	558	ProSiteProfiles	PRONE domain profile.	68	450	IPR005512	GO:0005085
	Pste8g01322	558	FunFam	Rop guanine nucleotide exchange factor 14	310	449	-	-
	Pste8g01322	558	PANTHER	ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1	20	488	IPR038937	GO:0005085
	Pste8g01322	558	MobiDBLite	consensus disorder prediction	1	40	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste8g01322	Pste-Chr8	7049429	7052848	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste7g02140	7	19601045	19604661	Pste8g01322	8	7049429	7052848	ECH
	Pste8g01322	8	7049429	7052848	Pste8g01322	8	7049429	7052848	ECH
	Pste7g02140	7	19601045	19604661	Pste8g01322	8	7049429	7052848	PCT